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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180705909
ODEJ01046760
243647
Bacillota
TTT
Lys
>WENV180705414
ODEJ01004292
178679
Bacillota
CAT
Met
>WENV180705489
ODEJ01006125
16842
Bacillota
CGA
Ser
>WENV180705013
ODEJ01000554
267649
Bacillota
TAC
Val
>WENV180705266
ODEJ01002264
267649
Bacillota
TAC
Val
>WENV180706069
ODEJ01130539
267556
Bacillota
TAC
Val
>WENV180705819
ODEJ01028323
246392
Bacillota
GTT
Asn
>WENV180705858
ODEJ01034257
243119
Bacillota
CTT
Lys
>WENV180705919
ODEJ01050728
235150
Bacillota
TGC
Ala
>WENV180705951
ODEJ01056790
152047
Bacillota
GGG
Pro
>WENV180705791
ODEJ01024983
235137
Bacillota
TGC
Ala
>WENV180705918
ODEJ01047824
241761
Bacillota
TAC
Val
>WENV180705520
ODEJ01006823
419288
Bacillota
GGT
Thr
>WENV180705539
ODEJ01007799
16834
Bacillota
GCT
Ser
>WENV180705678
ODEJ01013277
16834
Bacillota
GCT
Ser
>WENV180705298
ODEJ01002875
243646
Bacillota
GTT
Asn
>WENV180705478
ODEJ01005793
243646
Bacillota
GTT
Asn
>WENV180706038
ODEJ01099001
243646
Bacillota
GTT
Asn
>WENV180705153
ODEJ01001053
114002
Bacillota
CAA
Leu
>WENV180705337
ODEJ01003412
114002
Bacillota
CAA
Leu
>WENV180705915
ODEJ01047824
342736
Bacillota
TTG
Gln
>WENV180705404
ODEJ01004053
37437
Bacillota
TAA
Leu
>WENV180705518
ODEJ01006778
37437
Bacillota
TAA
Leu
>WENV180705842
ODEJ01031642
162028
Bacillota
ACG
Arg
>WENV180705420
ODEJ01004292
113951
Bacillota
GTA
Tyr
>WENV180706084
ODEJ01140856
243612
Bacillota
TAC
Val
>WENV180705944
ODEJ01055392
37551
Bacillota
CGA
Ser
>WENV180705538
ODEJ01007755
147135
Bacillota
ACG
Arg
>WENV180706046
ODEJ01107205
144599
Bacillota
GTC
Asp
>WENV180705812
ODEJ01027493
148268
Bacillota
CGG
Pro
>WENV180705418
ODEJ01004292
242848
Bacillota
GAA
Phe
>WENV180705644
ODEJ01011761
242848
Bacillota
GAA
Phe
>WENV180705098
ODEJ01000846
342895
Bacillota
CAT
Met
>WENV180705542
ODEJ01007884
342895
Bacillota
CAT
Met
>WENV180706064
ODEJ01126154
419945
Bacillota
GCA
Cys
>WENV180705475
ODEJ01005755
185292
Bacillota
ACG
Arg
>WENV180705291
ODEJ01002711
250349
Bacillota
GAA
Phe
>WENV180705401
ODEJ01004053
250349
Bacillota
GAA
Phe
>WENV180705547
ODEJ01008094
250349
Bacillota
GAA
Phe
>WENV180705723
ODEJ01016012
250349
Bacillota
GAA
Phe
>WENV180705764
ODEJ01021476
250349
Bacillota
GAA
Phe
>WENV180705780
ODEJ01023317
250349
Bacillota
GAA
Phe
>WENV180705234
ODEJ01001826
237846
Bacillota
GCC
Gly
>WENV180705290
ODEJ01002711
235197
Bacillota
GTC
Asp
>WENV180705400
ODEJ01004053
235197
Bacillota
GTC
Asp
>WENV180706095
ODEJ01149794
235197
Bacillota
GTC
Asp
>WENV180705402
ODEJ01004053
368876
Bacillota
GCC
Gly
>WENV180705477
ODEJ01005793
368876
Bacillota
GCC
Gly
>WENV180706037
ODEJ01099001
368876
Bacillota
GCC
Gly
>WENV180705820
ODEJ01028741
152051
Bacillota
ACG
Arg
>WENV180705645
ODEJ01011761
278268
Bacillota
GTG
His
>WENV180705472
ODEJ01005740
147183
Bacillota
GTT
Asn
>WENV180705640
ODEJ01011761
147183
Bacillota
GTT
Asn
>WENV180705557
ODEJ01008436
157838
Bacillota
GTC
Asp
>WENV180705907
ODEJ01046760
243613
Bacillota
GTG
His
>WENV180705838
ODEJ01031642
256920
Bacillota
TTT
Lys
>WENV180705654
ODEJ01012151
152491
Bacillota
CAT
Met
>WENV180706018
ODEJ01086864
144762
Bacillota
TCT
Arg
>WENV180705650
ODEJ01012151
273029
Bacillota
TGT
Thr
>WENV180705653
ODEJ01012151
281472
Bacillota
GGT
Thr
>WENV180705698
ODEJ01014126
178024
Bacillota
TCT
Arg
>WENV180705655
ODEJ01012182
413657
Bacillota
CCC
Gly
>WENV180705825
ODEJ01029020
272488
Bacillota
GAA
Phe
>WENV180705908
ODEJ01046760
343027
Bacillota
TTG
Gln
>WENV180705338
ODEJ01003438
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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