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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180726276
ODGS01101417
242888
Fusobacteriota
GTT
Asn
>WENV180726176
ODGS01045772
151857
Fusobacteriota
TCT
Arg
>WENV180726153
ODGS01041242
115931
Fusobacteriota
TAG
Leu
>WENV180725846
ODGS01004394
246241
Fusobacteriota
TGC
Ala
>WENV180726275
ODGS01101274
343015
Fusobacteriota
TTG
Gln
>WENV180726317
ODGS01117494
242889
Fusobacteriota
TGT
Thr
>WENV180726296
ODGS01115248
242891
Fusobacteriota
CTT
Lys
>WENV180726177
ODGS01045772
127801
Fusobacteriota
CAT
Met
>WENV180726315
ODGS01116618
267548
Fusobacteriota
TCC
Gly
>WENV180726314
ODGS01116556
151854
Fusobacteriota
TGG
Pro
>WENV180726175
ODGS01045772
248546
Fusobacteriota
TTT
Lys
>WENV180726269
ODGS01097230
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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