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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180730489
ODGV01006708
119661
Verrucomicrobiota
CAA
Leu
>WENV180730259
ODGV01002937
155256
Verrucomicrobiota
TCT
Arg
>WENV180730589
ODGV01009679
246701
Verrucomicrobiota
TTT
Lys
>WENV180730905
ODGV01032010
345133
Verrucomicrobiota
GAC
Val
>WENV180730861
ODGV01027325
82054
Verrucomicrobiota
GTA
Tyr
>WENV180730496
ODGV01006835
246677
Verrucomicrobiota
CTT
Lys
>WENV180730445
ODGV01005702
344844
Verrucomicrobiota
GCA
Cys
>WENV180731010
ODGV01053233
155264
Verrucomicrobiota
GGG
Pro
>WENV180730501
ODGV01006917
414625
Verrucomicrobiota
CCC
Gly
>WENV180730318
ODGV01003721
46246
Verrucomicrobiota
TGA
Ser
>WENV180730446
ODGV01005702
246700
Verrucomicrobiota
TTC
Glu
>WENV180730497
ODGV01006848
246687
Verrucomicrobiota
CGC
Ala
>WENV180730557
ODGV01008259
344841
Verrucomicrobiota
CAC
Val
>WENV180730509
ODGV01007069
405704
Verrucomicrobiota
GCC
Gly
>WENV180730973
ODGV01044234
60880
Verrucomicrobiota
CAG
Leu
>WENV180730687
ODGV01014101
82056
Verrucomicrobiota
TAA
Leu
>WENV180730495
ODGV01006835
344842
Verrucomicrobiota
CGT
Thr
>WENV180730530
ODGV01007676
170105
Verrucomicrobiota
CAT
Met
>WENV180730639
ODGV01011467
287733
Verrucomicrobiota
CCA
Trp
>WENV180730683
ODGV01013658
345123
Verrucomicrobiota
TGT
Thr
>WENV180730260
ODGV01002976
345110
Verrucomicrobiota
CCT
Arg
>WENV180730769
ODGV01019718
344839
Verrucomicrobiota
GTG
His
>WENV180730566
ODGV01008426
7274
Verrucomicrobiota
CGA
Ser
>WENV180730521
ODGV01007405
246260
Verrucomicrobiota
>WENV180730482
ODGV01006600
155268
Verrucomicrobiota
CGG
Pro
>WENV180730504
ODGV01006965
246728
Verrucomicrobiota
GAA
Phe
>WENV180730531
ODGV01007699
7256
Verrucomicrobiota
GCT
Ser
>WENV180730438
ODGV01005525
345115
Verrucomicrobiota
CAT
Met
>WENV180730567
ODGV01008492
345119
Verrucomicrobiota
TAC
Val
>WENV180730252
ODGV01002873
345124
Verrucomicrobiota
GTT
Asn
>WENV180730311
ODGV01003605
345142
Verrucomicrobiota
CCG
Arg
>WENV180730565
ODGV01008417
246709
Verrucomicrobiota
CAT
Met
>WENV180730505
ODGV01006965
154693
Verrucomicrobiota
TGG
Pro
>WENV180730826
ODGV01024406
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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