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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180746129
ODHM01007815
242888
Fusobacteriota
GTT
Asn
>WENV180746069
ODHM01002600
151858
Fusobacteriota
GAT
Ile
>WENV180746036
ODHM01001384
151860
Fusobacteriota
ACG
Arg
>WENV180746161
ODHM01011281
151857
Fusobacteriota
TCT
Arg
>WENV180746153
ODHM01010726
156827
Fusobacteriota
GTC
Asp
>WENV180746155
ODHM01010726
115931
Fusobacteriota
TAG
Leu
>WENV180746289
ODHM01047364
152483
Fusobacteriota
GTC
Asp
>WENV180746163
ODHM01011281
342616
Fusobacteriota
TTC
Glu
>WENV180746154
ODHM01010726
242889
Fusobacteriota
TGT
Thr
>WENV180746037
ODHM01001384
60218
Fusobacteriota
CAA
Leu
>WENV180746150
ODHM01010726
242891
Fusobacteriota
CTT
Lys
>WENV180746156
ODHM01010726
286115
Fusobacteriota
GCC
Gly
>WENV180746070
ODHM01002600
151855
Fusobacteriota
TGC
Ala
>WENV180746157
ODHM01010726
151855
Fusobacteriota
TGC
Ala
>WENV180746162
ODHM01011281
127801
Fusobacteriota
CAT
Met
>WENV180746160
ODHM01011281
248546
Fusobacteriota
TTT
Lys
>WENV180746151
ODHM01010726
377837
Fusobacteriota
TTC
Glu
>WENV180746270
ODHM01038205
45759
Fusobacteriota
TAA
Leu
>WENV180746158
ODHM01010726
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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