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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180758786
ODHX01017681
314498
Actinomycetota
GGC
Ala
>WENV180758856
ODHX01043739
340959
Actinomycetota
GTT
Asn
>WENV180758872
ODHX01051208
149272
Actinomycetota
TTT
Lys
>WENV180758817
ODHX01026751
418439
Actinomycetota
TCC
Gly
>WENV180758833
ODHX01035735
149271
Actinomycetota
CAT
Met
>WENV180758703
ODHX01006357
239204
Actinomycetota
CTT
Lys
>WENV180758882
ODHX01058111
148467
Actinomycetota
CAT
Met
>WENV180758884
ODHX01060896
246222
Actinomycetota
CCG
Arg
>WENV180758894
ODHX01069611
37359
Actinomycetota
>WENV180758859
ODHX01044379
149270
Actinomycetota
GTC
Asp
>WENV180758798
ODHX01021030
152190
Actinomycetota
GAT
Ile
>WENV180758823
ODHX01031266
59716
Actinomycetota
CAG
Leu
>WENV180758881
ODHX01057806
246365
Actinomycetota
ACG
Arg
>WENV180758821
ODHX01028732
240124
Actinomycetota
CGT
Thr
>WENV180758737
ODHX01010479
412870
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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