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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180762270
ODHZ01091759
155256
Verrucomicrobiota
TCT
Arg
>WENV180762608
ODHZ01222727
246701
Verrucomicrobiota
TTT
Lys
>WENV180761913
ODHZ01037951
345141
Verrucomicrobiota
TTG
Gln
>WENV180762197
ODHZ01073855
82054
Verrucomicrobiota
GTA
Tyr
>WENV180762342
ODHZ01106923
155264
Verrucomicrobiota
GGG
Pro
>WENV180762495
ODHZ01162176
344845
Verrucomicrobiota
CTG
Gln
>WENV180762290
ODHZ01094635
128202
Verrucomicrobiota
GTC
Asp
>WENV180762093
ODHZ01057294
414625
Verrucomicrobiota
CCC
Gly
>WENV180761851
ODHZ01032352
97755
Verrucomicrobiota
TAG
Leu
>WENV180762094
ODHZ01057294
419909
Verrucomicrobiota
TCC
Gly
>WENV180761204
ODHZ01006096
344841
Verrucomicrobiota
CAC
Val
>WENV180761333
ODHZ01008957
405704
Verrucomicrobiota
GCC
Gly
>WENV180761951
ODHZ01040610
82056
Verrucomicrobiota
TAA
Leu
>WENV180761881
ODHZ01034979
345110
Verrucomicrobiota
CCT
Arg
>WENV180762041
ODHZ01051642
345115
Verrucomicrobiota
CAT
Met
>WENV180762293
ODHZ01095037
345124
Verrucomicrobiota
GTT
Asn
>WENV180762592
ODHZ01210032
345142
Verrucomicrobiota
CCG
Arg
>WENV180762028
ODHZ01049979
246709
Verrucomicrobiota
CAT
Met
>WENV180762573
ODHZ01193957
154693
Verrucomicrobiota
TGG
Pro
>WENV180762379
ODHZ01117828
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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