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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180784597
ODIR01000510
119661
Verrucomicrobiota
CAA
Leu
>WENV180784741
ODIR01000944
155256
Verrucomicrobiota
TCT
Arg
>WENV180784756
ODIR01000990
246701
Verrucomicrobiota
TTT
Lys
>WENV180785246
ODIR01004993
345141
Verrucomicrobiota
TTG
Gln
>WENV180785343
ODIR01007005
345133
Verrucomicrobiota
GAC
Val
>WENV180784357
ODIR01000153
82054
Verrucomicrobiota
GTA
Tyr
>WENV180784960
ODIR01002003
246677
Verrucomicrobiota
CTT
Lys
>WENV180784961
ODIR01002003
246677
Verrucomicrobiota
CTT
Lys
>WENV180784819
ODIR01001202
344844
Verrucomicrobiota
GCA
Cys
>WENV180784463
ODIR01000283
155264
Verrucomicrobiota
GGG
Pro
>WENV180785581
ODIR01016723
344845
Verrucomicrobiota
CTG
Gln
>WENV180785066
ODIR01002895
128202
Verrucomicrobiota
GTC
Asp
>WENV180785014
ODIR01002419
414625
Verrucomicrobiota
CCC
Gly
>WENV180784955
ODIR01001967
46246
Verrucomicrobiota
TGA
Ser
>WENV180784495
ODIR01000345
97755
Verrucomicrobiota
TAG
Leu
>WENV180784820
ODIR01001202
246700
Verrucomicrobiota
TTC
Glu
>WENV180784894
ODIR01001513
246700
Verrucomicrobiota
TTC
Glu
>WENV180784704
ODIR01000833
246687
Verrucomicrobiota
CGC
Ala
>WENV180785015
ODIR01002419
419909
Verrucomicrobiota
TCC
Gly
>WENV180784573
ODIR01000475
344841
Verrucomicrobiota
CAC
Val
>WENV180785063
ODIR01002859
60880
Verrucomicrobiota
CAG
Leu
>WENV180784652
ODIR01000686
82056
Verrucomicrobiota
TAA
Leu
>WENV180784959
ODIR01002003
344842
Verrucomicrobiota
CGT
Thr
>WENV180784767
ODIR01001008
170105
Verrucomicrobiota
CAT
Met
>WENV180785172
ODIR01003898
287733
Verrucomicrobiota
CCA
Trp
>WENV180784865
ODIR01001367
345123
Verrucomicrobiota
TGT
Thr
>WENV180785116
ODIR01003324
345110
Verrucomicrobiota
CCT
Arg
>WENV180784895
ODIR01001513
344839
Verrucomicrobiota
GTG
His
>WENV180784385
ODIR01000195
7274
Verrucomicrobiota
CGA
Ser
>WENV180784653
ODIR01000686
246260
Verrucomicrobiota
>WENV180785010
ODIR01002384
155268
Verrucomicrobiota
CGG
Pro
>WENV180784686
ODIR01000797
82181
Verrucomicrobiota
AAG
Leu
>WENV180784461
ODIR01000283
246728
Verrucomicrobiota
GAA
Phe
>WENV180784654
ODIR01000686
7256
Verrucomicrobiota
GCT
Ser
>WENV180784679
ODIR01000784
345115
Verrucomicrobiota
CAT
Met
>WENV180784854
ODIR01001349
345119
Verrucomicrobiota
TAC
Val
>WENV180784356
ODIR01000153
345124
Verrucomicrobiota
GTT
Asn
>WENV180784689
ODIR01000801
17023
Verrucomicrobiota
GGA
Ser
>WENV180784922
ODIR01001732
368497
Verrucomicrobiota
GCC
Gly
>WENV180785038
ODIR01002643
368497
Verrucomicrobiota
GCC
Gly
>WENV180784315
ODIR01000133
345142
Verrucomicrobiota
CCG
Arg
>WENV180784896
ODIR01001513
246709
Verrucomicrobiota
CAT
Met
>WENV180784462
ODIR01000283
154693
Verrucomicrobiota
TGG
Pro
>WENV180784706
ODIR01000844
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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