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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180796447
ODJB01004892
81880
Gammaproteobacteria
GAG
Leu
>WENV180797046
ODJB01026416
81880
Gammaproteobacteria
GAG
Leu
>WENV180798108
ODJB01262461
81880
Gammaproteobacteria
GAG
Leu
>WENV180797527
ODJB01071558
238438
Gammaproteobacteria
>WENV180797528
ODJB01071558
238438
Gammaproteobacteria
>WENV180797529
ODJB01071558
238438
Gammaproteobacteria
>WENV180798184
ODJB01327578
103428
Gammaproteobacteria
TAG
Leu
>WENV180796296
ODJB01002842
3276
Gammaproteobacteria
>WENV180796923
ODJB01019747
145168
Gammaproteobacteria
CAT
Met
>WENV180798110
ODJB01263465
145168
Gammaproteobacteria
CAT
Met
>WENV180797356
ODJB01050002
150561
Gammaproteobacteria
ACG
Arg
>WENV180797977
ODJB01193567
339913
Gammaproteobacteria
TTT
Lys
>WENV180798315
ODJB01427198
339913
Gammaproteobacteria
TTT
Lys
>WENV180798337
ODJB01429865
339913
Gammaproteobacteria
TTT
Lys
>WENV180797438
ODJB01060590
254333
Gammaproteobacteria
TGT
Thr
>WENV180798205
ODJB01349744
3247
Gammaproteobacteria
GCT
Ser
>WENV180797440
ODJB01060590
358575
Gammaproteobacteria
TCC
Gly
>WENV180796201
ODJB01001950
58828
Gammaproteobacteria
TAA
Leu
>WENV180797574
ODJB01079494
8480
Gammaproteobacteria
GCT
Ser
>WENV180795922
ODJB01000605
3278
Gammaproteobacteria
>WENV180796904
ODJB01018409
147498
Gammaproteobacteria
GAC
Val
>WENV180795648
ODJB01000102
147761
Gammaproteobacteria
TGG
Pro
>WENV180797269
ODJB01042063
147761
Gammaproteobacteria
TGG
Pro
>WENV180797896
ODJB01156626
147761
Gammaproteobacteria
TGG
Pro
>WENV180798297
ODJB01422876
147761
Gammaproteobacteria
TGG
Pro
>WENV180798306
ODJB01425330
147761
Gammaproteobacteria
TGG
Pro
>WENV180796985
ODJB01023408
59415
Gammaproteobacteria
TAA
Leu
>WENV180796152
ODJB01001624
147499
Gammaproteobacteria
CTT
Lys
>WENV180797532
ODJB01072091
147499
Gammaproteobacteria
CTT
Lys
>WENV180798328
ODJB01428589
147499
Gammaproteobacteria
CTT
Lys
>WENV180795650
ODJB01000102
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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