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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180859958
ODLD01009234
243647
Bacillota
TTT
Lys
>WENV180860028
ODLD01013088
243647
Bacillota
TTT
Lys
>WENV180859794
ODLD01004709
16842
Bacillota
CGA
Ser
>WENV180860539
ODLD01147013
390153
Bacillota
GCC
Gly
>WENV180859576
ODLD01001561
342730
Bacillota
CTC
Glu
>WENV180859577
ODLD01001561
342730
Bacillota
CTC
Glu
>WENV180859526
ODLD01001125
243099
Bacillota
GTT
Asn
>WENV180859680
ODLD01002375
243099
Bacillota
GTT
Asn
>WENV180860387
ODLD01059394
307003
Bacillota
TGC
Ala
>WENV180860029
ODLD01013088
391536
Bacillota
TTC
Glu
>WENV180859684
ODLD01002375
241761
Bacillota
TAC
Val
>WENV180859816
ODLD01004953
16834
Bacillota
GCT
Ser
>WENV180859727
ODLD01003055
114002
Bacillota
CAA
Leu
>WENV180859532
ODLD01001133
37437
Bacillota
TAA
Leu
>WENV180860320
ODLD01045002
113951
Bacillota
GTA
Tyr
>WENV180860030
ODLD01013088
243612
Bacillota
TAC
Val
>WENV180859226
ODLD01000088
199366
Bacillota
CAT
Met
>WENV180859486
ODLD01000894
199366
Bacillota
CAT
Met
>WENV180859690
ODLD01002375
81382
Bacillota
GAG
Leu
>WENV180859333
ODLD01000350
341796
Bacillota
CCG
Arg
>WENV180860068
ODLD01015819
341796
Bacillota
CCG
Arg
>WENV180859441
ODLD01000694
286137
Bacillota
GAA
Phe
>WENV180859686
ODLD01002375
286137
Bacillota
GAA
Phe
>WENV180859273
ODLD01000194
338676
Bacillota
CCG
Arg
>WENV180860073
ODLD01016254
338676
Bacillota
CCG
Arg
>WENV180860125
ODLD01021444
338676
Bacillota
CCG
Arg
>WENV180859483
ODLD01000894
81373
Bacillota
GTA
Tyr
>WENV180859225
ODLD01000088
81373
Bacillota
GTA
Tyr
>WENV180859934
ODLD01008741
147135
Bacillota
ACG
Arg
>WENV180860537
ODLD01146770
242848
Bacillota
GAA
Phe
>WENV180859418
ODLD01000664
199741
Bacillota
CAT
Met
>WENV180859982
ODLD01010284
342895
Bacillota
CAT
Met
>WENV180859808
ODLD01004839
194150
Bacillota
TGG
Pro
>WENV180860416
ODLD01070379
185292
Bacillota
ACG
Arg
>WENV180860388
ODLD01059394
152019
Bacillota
GAT
Ile
>WENV180859528
ODLD01001133
235197
Bacillota
GTC
Asp
>WENV180860202
ODLD01030163
235197
Bacillota
GTC
Asp
>WENV180859530
ODLD01001133
368876
Bacillota
GCC
Gly
>WENV180860026
ODLD01013088
368876
Bacillota
GCC
Gly
>WENV180859227
ODLD01000088
241526
Bacillota
CTT
Lys
>WENV180859683
ODLD01002375
241526
Bacillota
CTT
Lys
>WENV180859956
ODLD01009234
243613
Bacillota
GTG
His
>WENV180859439
ODLD01000694
347851
Bacillota
TTC
Glu
>WENV180860421
ODLD01073299
347851
Bacillota
TTC
Glu
>WENV180860226
ODLD01033343
144672
Bacillota
TCT
Arg
>WENV180859397
ODLD01000581
127572
Bacillota
ACG
Arg
>WENV180860053
ODLD01014228
127572
Bacillota
ACG
Arg
>WENV180859803
ODLD01004762
152491
Bacillota
CAT
Met
>WENV180859412
ODLD01000653
74162
Bacillota
CAA
Leu
>WENV180860312
ODLD01043990
74162
Bacillota
CAA
Leu
>WENV180859485
ODLD01000894
243098
Bacillota
GGT
Thr
>WENV180859799
ODLD01004762
273029
Bacillota
TGT
Thr
>WENV180859802
ODLD01004762
281472
Bacillota
GGT
Thr
>WENV180859810
ODLD01004839
178024
Bacillota
TCT
Arg
>WENV180859503
ODLD01000988
413657
Bacillota
CCC
Gly
>WENV180859847
ODLD01005690
152018
Bacillota
CCT
Arg
>WENV180860372
ODLD01057245
272488
Bacillota
GAA
Phe
>WENV180859691
ODLD01002375
81598
Bacillota
CAG
Leu
>WENV180859442
ODLD01000694
384950
Bacillota
GCC
Gly
>WENV180859462
ODLD01000760
384950
Bacillota
GCC
Gly
>WENV180859698
ODLD01002634
287034
Bacillota
GTT
Asn
>WENV180860027
ODLD01013088
287034
Bacillota
GTT
Asn
>WENV180859957
ODLD01009234
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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