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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180887623
ODMI01033400
246615
Bacteroidota
TCC
Gly
>WENV180887645
ODMI01045175
97610
Bacteroidota
GTA
Tyr
>WENV180887637
ODMI01037169
119907
Bacteroidota
CAA
Leu
>WENV180887626
ODMI01034670
99288
Bacteroidota
TAG
Leu
>WENV180887660
ODMI01060865
344824
Bacteroidota
CCG
Arg
>WENV180887582
ODMI01019870
340029
Bacteroidota
TTC
Glu
>WENV180887578
ODMI01018070
128178
Bacteroidota
TAC
Val
>WENV180887634
ODMI01036321
268513
Bacteroidota
TCC
Gly
>WENV180887586
ODMI01021718
191087
Bacteroidota
TCT
Arg
>WENV180887642
ODMI01043868
37794
Bacteroidota
TAA
Leu
>WENV180887629
ODMI01035292
60822
Bacteroidota
GAG
Leu
>WENV180887420
ODMI01001384
148247
Bacteroidota
TGC
Ala
>WENV180887669
ODMI01063348
242581
Bacteroidota
TTT
Lys
>WENV180887601
ODMI01026082
128249
Bacteroidota
TGG
Pro
>WENV180887465
ODMI01002952
96124
Bacteroidota
TAG
Leu
>WENV180887544
ODMI01010057
414472
Bacteroidota
TTG
Gln
>WENV180887522
ODMI01007623
345164
Bacteroidota
CCT
Arg
>WENV180887584
ODMI01020868
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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