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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180888326
ODMN01000457
243647
Bacillota
TTT
Lys
>WENV180888831
ODMN01004184
243647
Bacillota
TTT
Lys
>WENV180888546
ODMN01001575
16842
Bacillota
CGA
Ser
>WENV180888182
ODMN01000183
342730
Bacillota
CTC
Glu
>WENV180889391
ODMN01038624
342730
Bacillota
CTC
Glu
>WENV180889179
ODMN01016599
148348
Bacillota
GTC
Asp
>WENV180889774
ODMN01136763
148348
Bacillota
GTC
Asp
>WENV180889958
ODMN01257996
148348
Bacillota
GTC
Asp
>WENV180888267
ODMN01000348
243099
Bacillota
GTT
Asn
>WENV180889752
ODMN01130863
243099
Bacillota
GTT
Asn
>WENV180889510
ODMN01053003
307003
Bacillota
TGC
Ala
>WENV180889654
ODMN01086252
307003
Bacillota
TGC
Ala
>WENV180889702
ODMN01108983
307003
Bacillota
TGC
Ala
>WENV180889711
ODMN01110891
307003
Bacillota
TGC
Ala
>WENV180889791
ODMN01145809
307003
Bacillota
TGC
Ala
>WENV180889910
ODMN01247664
235150
Bacillota
TGC
Ala
>WENV180889625
ODMN01077306
235137
Bacillota
TGC
Ala
>WENV180889893
ODMN01220007
308424
Bacillota
TTT
Lys
>WENV180889940
ODMN01254437
391536
Bacillota
TTC
Glu
>WENV180889886
ODMN01212604
241761
Bacillota
TAC
Val
>WENV180888808
ODMN01003915
16834
Bacillota
GCT
Ser
>WENV180888385
ODMN01000732
114002
Bacillota
CAA
Leu
>WENV180889941
ODMN01254437
243612
Bacillota
TAC
Val
>WENV180887989
ODMN01000008
199366
Bacillota
CAT
Met
>WENV180888514
ODMN01001401
199366
Bacillota
CAT
Met
>WENV180889736
ODMN01119221
199366
Bacillota
CAT
Met
>WENV180888142
ODMN01000084
341796
Bacillota
CCG
Arg
>WENV180889063
ODMN01011281
341796
Bacillota
CCG
Arg
>WENV180888449
ODMN01001008
286137
Bacillota
GAA
Phe
>WENV180889961
ODMN01261763
286137
Bacillota
GAA
Phe
>WENV180888307
ODMN01000437
338676
Bacillota
CCG
Arg
>WENV180887988
ODMN01000008
81373
Bacillota
GTA
Tyr
>WENV180889332
ODMN01030558
81373
Bacillota
GTA
Tyr
>WENV180889924
ODMN01252082
81373
Bacillota
GTA
Tyr
>WENV180888604
ODMN01001879
147135
Bacillota
ACG
Arg
>WENV180889902
ODMN01234190
242848
Bacillota
GAA
Phe
>WENV180889724
ODMN01116603
109476
Bacillota
TAG
Leu
>WENV180889044
ODMN01010302
194150
Bacillota
TGG
Pro
>WENV180889361
ODMN01033850
185292
Bacillota
ACG
Arg
>WENV180888318
ODMN01000450
96694
Bacillota
TAG
Leu
>WENV180889178
ODMN01016599
304759
Bacillota
TAC
Val
>WENV180889511
ODMN01053003
152019
Bacillota
GAT
Ile
>WENV180889712
ODMN01110891
152019
Bacillota
GAT
Ile
>WENV180889792
ODMN01145809
152019
Bacillota
GAT
Ile
>WENV180889580
ODMN01064991
237846
Bacillota
GCC
Gly
>WENV180888200
ODMN01000225
235197
Bacillota
GTC
Asp
>WENV180888695
ODMN01002601
235197
Bacillota
GTC
Asp
>WENV180888202
ODMN01000225
368876
Bacillota
GCC
Gly
>WENV180888324
ODMN01000457
368876
Bacillota
GCC
Gly
>WENV180889921
ODMN01251605
368876
Bacillota
GCC
Gly
>WENV180889185
ODMN01016599
84171
Bacillota
GAG
Leu
>WENV180887990
ODMN01000008
241526
Bacillota
CTT
Lys
>WENV180888829
ODMN01004184
243613
Bacillota
GTG
His
>WENV180888447
ODMN01001008
347851
Bacillota
TTC
Glu
>WENV180889259
ODMN01022698
347851
Bacillota
TTC
Glu
>WENV180889579
ODMN01064700
347851
Bacillota
TTC
Glu
>WENV180888172
ODMN01000144
127572
Bacillota
ACG
Arg
>WENV180889186
ODMN01016708
127572
Bacillota
ACG
Arg
>WENV180888776
ODMN01003465
152491
Bacillota
CAT
Met
>WENV180888513
ODMN01001401
243098
Bacillota
GGT
Thr
>WENV180888140
ODMN01000084
241638
Bacillota
GTG
His
>WENV180888772
ODMN01003465
273029
Bacillota
TGT
Thr
>WENV180888775
ODMN01003465
281472
Bacillota
GGT
Thr
>WENV180889046
ODMN01010302
178024
Bacillota
TCT
Arg
>WENV180888453
ODMN01001011
315448
Bacillota
GGT
Thr
>WENV180889372
ODMN01035870
315448
Bacillota
GGT
Thr
>WENV180888541
ODMN01001549
413657
Bacillota
CCC
Gly
>WENV180888305
ODMN01000424
152018
Bacillota
CCT
Arg
>WENV180888748
ODMN01003159
81598
Bacillota
CAG
Leu
>WENV180889184
ODMN01016599
81598
Bacillota
CAG
Leu
>WENV180888450
ODMN01001008
384950
Bacillota
GCC
Gly
>WENV180888618
ODMN01002042
384950
Bacillota
GCC
Gly
>WENV180888619
ODMN01002042
384950
Bacillota
GCC
Gly
>WENV180888620
ODMN01002042
384950
Bacillota
GCC
Gly
>WENV180889779
ODMN01139179
384950
Bacillota
GCC
Gly
>WENV180888325
ODMN01000457
287034
Bacillota
GTT
Asn
>WENV180888931
ODMN01006593
287034
Bacillota
GTT
Asn
>WENV180889950
ODMN01255859
287034
Bacillota
GTT
Asn
>WENV180889048
ODMN01010440
413179
Bacillota
CCC
Gly
>WENV180889589
ODMN01067238
413179
Bacillota
CCC
Gly
>WENV180888830
ODMN01004184
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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