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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180891293
ODMO01143589
235146
Actinomycetota
CGT
Thr
>WENV180890443
ODMO01002490
314498
Actinomycetota
GGC
Ala
>WENV180890969
ODMO01029516
314498
Actinomycetota
GGC
Ala
>WENV180890433
ODMO01002321
261773
Actinomycetota
CCT
Arg
>WENV180890374
ODMO01001380
158373
Actinomycetota
GGG
Pro
>WENV180890641
ODMO01007411
158373
Actinomycetota
GGG
Pro
>WENV180890490
ODMO01003284
241401
Actinomycetota
CCA
Trp
>WENV180890238
ODMO01000334
440908
Actinomycetota
GCA
Cys
>WENV180890768
ODMO01013722
150473
Actinomycetota
CTC
Glu
>WENV180890273
ODMO01000542
246015
Actinomycetota
GTG
His
>WENV180890207
ODMO01000272
239204
Actinomycetota
CTT
Lys
>WENV180890515
ODMO01003679
239204
Actinomycetota
CTT
Lys
>WENV180890236
ODMO01000334
392594
Actinomycetota
GAC
Val
>WENV180890345
ODMO01001064
392594
Actinomycetota
GAC
Val
>WENV180890594
ODMO01006090
392594
Actinomycetota
GAC
Val
>WENV180890272
ODMO01000526
148467
Actinomycetota
CAT
Met
>WENV180890646
ODMO01007487
246299
Actinomycetota
CTT
Lys
>WENV180890647
ODMO01007487
246299
Actinomycetota
CTT
Lys
>WENV180890648
ODMO01007487
246299
Actinomycetota
CTT
Lys
>WENV180890258
ODMO01000458
246222
Actinomycetota
CCG
Arg
>WENV180890843
ODMO01018946
42714
Actinomycetota
GAG
Leu
>WENV180890698
ODMO01010047
149270
Actinomycetota
GTC
Asp
>WENV180890355
ODMO01001154
152190
Actinomycetota
GAT
Ile
>WENV180891032
ODMO01038653
162402
Actinomycetota
GGG
Pro
>WENV180891318
ODMO01152889
162402
Actinomycetota
GGG
Pro
>WENV180890210
ODMO01000272
293092
Actinomycetota
CTC
Glu
>WENV180890310
ODMO01000761
59716
Actinomycetota
CAG
Leu
>WENV180890679
ODMO01008594
246365
Actinomycetota
ACG
Arg
>WENV180890354
ODMO01001151
240124
Actinomycetota
CGT
Thr
>WENV180890541
ODMO01004287
240124
Actinomycetota
CGT
Thr
>WENV180890239
ODMO01000334
388111
Actinomycetota
>WENV180890826
ODMO01017396
412870
Actinomycetota
TCC
Gly
>WENV180890117
ODMO01000097
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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