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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180894953
ODMS01000587
147158
Actinomycetota
TTT
Lys
>WENV180894990
ODMS01008646
235605
Actinomycetota
CGT
Thr
>WENV180894943
ODMS01000316
147155
Actinomycetota
GTC
Asp
>WENV180894961
ODMS01001199
237816
Actinomycetota
GGT
Thr
>WENV180894970
ODMS01001582
147157
Actinomycetota
TAC
Val
>WENV180894975
ODMS01002415
339641
Actinomycetota
GAC
Val
>WENV180894940
ODMS01000143
415620
Actinomycetota
TCC
Gly
>WENV180894979
ODMS01002917
237815
Actinomycetota
CTT
Lys
>WENV180894972
ODMS01001721
237808
Actinomycetota
TGC
Ala
>WENV180894968
ODMS01001408
80899
Actinomycetota
CAG
Leu
>WENV180894978
ODMS01002634
266836
Actinomycetota
ACG
Arg
>WENV180894944
ODMS01000316
147156
Actinomycetota
GAA
Phe
>WENV180894962
ODMS01001199
338489
Actinomycetota
CAT
Met
>WENV180894942
ODMS01000219
237803
Actinomycetota
CGT
Thr
>WENV180894967
ODMS01001403
237812
Actinomycetota
CTC
Glu
>WENV180894939
ODMS01000063
45149
Actinomycetota
CGA
Ser
>WENV180894960
ODMS01001199
96033
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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