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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180898581
ODNS01000587
147158
Actinomycetota
TTT
Lys
>WENV180898600
ODNS01001721
290172
Actinomycetota
TGC
Ala
>WENV180898618
ODNS01008646
310699
Actinomycetota
CGT
Thr
>WENV180898571
ODNS01000316
147155
Actinomycetota
GTC
Asp
>WENV180898589
ODNS01001199
237816
Actinomycetota
GGT
Thr
>WENV180898592
ODNS01001346
304559
Actinomycetota
GCC
Gly
>WENV180898598
ODNS01001582
147157
Actinomycetota
TAC
Val
>WENV180898603
ODNS01002415
339641
Actinomycetota
GAC
Val
>WENV180898594
ODNS01001403
372831
Actinomycetota
CTG
Gln
>WENV180898606
ODNS01002634
289966
Actinomycetota
ACG
Arg
>WENV180898607
ODNS01002917
237815
Actinomycetota
CTT
Lys
>WENV180898596
ODNS01001408
80899
Actinomycetota
CAG
Leu
>WENV180898572
ODNS01000316
147156
Actinomycetota
GAA
Phe
>WENV180898590
ODNS01001199
338489
Actinomycetota
CAT
Met
>WENV180898570
ODNS01000219
237803
Actinomycetota
CGT
Thr
>WENV180898595
ODNS01001403
237812
Actinomycetota
CTC
Glu
>WENV180898567
ODNS01000063
45149
Actinomycetota
CGA
Ser
>WENV180898588
ODNS01001199
96033
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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