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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180917687
ODTD01073674
413566
Actinomycetota
CCC
Gly
>WENV180917733
ODTD01092979
361079
Actinomycetota
CTG
Gln
>WENV180917641
ODTD01057492
241401
Actinomycetota
CCA
Trp
>WENV180917762
ODTD01108887
150473
Actinomycetota
CTC
Glu
>WENV180917584
ODTD01046468
246015
Actinomycetota
GTG
His
>WENV180917767
ODTD01111008
239204
Actinomycetota
CTT
Lys
>WENV180917357
ODTD01015893
148467
Actinomycetota
CAT
Met
>WENV180917493
ODTD01035219
246299
Actinomycetota
CTT
Lys
>WENV180917140
ODTD01005006
235388
Actinomycetota
GTG
His
>WENV180917797
ODTD01136653
152190
Actinomycetota
GAT
Ile
>WENV180916740
ODTD01000841
162402
Actinomycetota
GGG
Pro
>WENV180917564
ODTD01044511
293092
Actinomycetota
CTC
Glu
>WENV180917585
ODTD01046530
59716
Actinomycetota
CAG
Leu
>WENV180917291
ODTD01011504
246365
Actinomycetota
ACG
Arg
>WENV180917674
ODTD01067173
240124
Actinomycetota
CGT
Thr
>WENV180916837
ODTD01001468
236216
Actinomycetota
GGC
Ala
>WENV180917831
ODTD01155219
236216
Actinomycetota
GGC
Ala
>WENV180917670
ODTD01066750
154637
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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