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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
133 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180925529
ODTL01000001
235097
Bacteroidota
TTT
Lys
>WENV180925548
ODTL01000011
235097
Bacteroidota
TTT
Lys
>WENV180925727
ODTL01000159
235097
Bacteroidota
TTT
Lys
>WENV180925551
ODTL01000012
235102
Bacteroidota
CGT
Thr
>WENV180926526
ODTL01009233
267954
Bacteroidota
GCC
Gly
>WENV180925597
ODTL01000042
144657
Bacteroidota
CGG
Pro
>WENV180926066
ODTL01001054
144657
Bacteroidota
CGG
Pro
>WENV180925886
ODTL01000445
243025
Bacteroidota
CAT
Met
>WENV180926260
ODTL01002947
243025
Bacteroidota
CAT
Met
>WENV180926422
ODTL01005767
243025
Bacteroidota
CAT
Met
>WENV180925628
ODTL01000052
338155
Bacteroidota
CTC
Glu
>WENV180925892
ODTL01000467
338155
Bacteroidota
CTC
Glu
>WENV180926721
ODTL01027715
153993
Bacteroidota
GAT
Ile
>WENV180926826
ODTL01052237
339341
Bacteroidota
GGT
Thr
>WENV180925830
ODTL01000343
343138
Bacteroidota
CCT
Arg
>WENV180925957
ODTL01000629
343138
Bacteroidota
CCT
Arg
>WENV180925572
ODTL01000021
58715
Bacteroidota
GAG
Leu
>WENV180925935
ODTL01000571
58715
Bacteroidota
GAG
Leu
>WENV180926218
ODTL01002374
46165
Bacteroidota
TGA
Ser
>WENV180926577
ODTL01012100
17323
Bacteroidota
GGA
Ser
>WENV180925554
ODTL01000013
338486
Bacteroidota
CAT
Met
>WENV180925604
ODTL01000045
338486
Bacteroidota
CAT
Met
>WENV180926001
ODTL01000764
338486
Bacteroidota
CAT
Met
>WENV180926137
ODTL01001425
338486
Bacteroidota
CAT
Met
>WENV180925571
ODTL01000021
59689
Bacteroidota
CAG
Leu
>WENV180925594
ODTL01000042
59689
Bacteroidota
CAG
Leu
>WENV180925584
ODTL01000029
436206
Bacteroidota
TTG
Gln
>WENV180926025
ODTL01000860
436206
Bacteroidota
TTG
Gln
>WENV180927040
ODTL01161827
436206
Bacteroidota
TTG
Gln
>WENV180925600
ODTL01000042
20893
Bacteroidota
GGA
Ser
>WENV180926106
ODTL01001238
20893
Bacteroidota
GGA
Ser
>WENV180926829
ODTL01053845
20893
Bacteroidota
GGA
Ser
>WENV180926183
ODTL01001944
344692
Bacteroidota
GGT
Thr
>WENV180926353
ODTL01004164
344692
Bacteroidota
GGT
Thr
>WENV180926596
ODTL01013440
344692
Bacteroidota
GGT
Thr
>WENV180925893
ODTL01000469
338124
Bacteroidota
CCG
Arg
>WENV180925887
ODTL01000451
235203
Bacteroidota
TTT
Lys
>WENV180926219
ODTL01002374
238121
Bacteroidota
CTT
Lys
>WENV180925859
ODTL01000383
126641
Bacteroidota
TAC
Val
>WENV180927118
ODTL01214312
126641
Bacteroidota
TAC
Val
>WENV180925648
ODTL01000072
338132
Bacteroidota
GCA
Cys
>WENV180925705
ODTL01000141
338132
Bacteroidota
GCA
Cys
>WENV180925751
ODTL01000195
338132
Bacteroidota
GCA
Cys
>WENV180925783
ODTL01000238
338132
Bacteroidota
GCA
Cys
>WENV180925820
ODTL01000318
338132
Bacteroidota
GCA
Cys
>WENV180925822
ODTL01000326
338132
Bacteroidota
GCA
Cys
>WENV180925843
ODTL01000354
338132
Bacteroidota
GCA
Cys
>WENV180925898
ODTL01000482
45423
Bacteroidota
TGA
Ser
>WENV180925661
ODTL01000080
193809
Bacteroidota
CAT
Met
>WENV180925685
ODTL01000113
58714
Bacteroidota
CAA
Leu
>WENV180926126
ODTL01001312
301449
Bacteroidota
CGG
Pro
>WENV180926200
ODTL01002093
301449
Bacteroidota
CGG
Pro
>WENV180926277
ODTL01003071
301449
Bacteroidota
CGG
Pro
>WENV180926321
ODTL01003544
301449
Bacteroidota
CGG
Pro
>WENV180927107
ODTL01211936
301449
Bacteroidota
CGG
Pro
>WENV180925813
ODTL01000302
144933
Bacteroidota
TCT
Arg
>WENV180925996
ODTL01000755
144933
Bacteroidota
TCT
Arg
>WENV180925673
ODTL01000099
144656
Bacteroidota
GTG
His
>WENV180925816
ODTL01000311
235207
Bacteroidota
CAT
Met
>WENV180925806
ODTL01000275
144659
Bacteroidota
GTG
His
>WENV180925807
ODTL01000275
144659
Bacteroidota
GTG
His
>WENV180925598
ODTL01000042
235180
Bacteroidota
CCA
Trp
>WENV180925905
ODTL01000518
144596
Bacteroidota
GGC
Ala
>WENV180925587
ODTL01000032
80607
Bacteroidota
GTA
Tyr
>WENV180925743
ODTL01000180
80607
Bacteroidota
GTA
Tyr
>WENV180926326
ODTL01003655
80607
Bacteroidota
GTA
Tyr
>WENV180927106
ODTL01211878
80607
Bacteroidota
GTA
Tyr
>WENV180926145
ODTL01001529
113604
Bacteroidota
>WENV180925680
ODTL01000108
16999
Bacteroidota
GGA
Ser
>WENV180925574
ODTL01000021
80614
Bacteroidota
>WENV180926085
ODTL01001127
80614
Bacteroidota
>WENV180926210
ODTL01002261
80614
Bacteroidota
>WENV180926371
ODTL01004332
80614
Bacteroidota
>WENV180927094
ODTL01211205
80614
Bacteroidota
>WENV180925690
ODTL01000116
52358
Bacteroidota
TGA
Ser
>WENV180925715
ODTL01000150
52358
Bacteroidota
TGA
Ser
>WENV180925744
ODTL01000181
52358
Bacteroidota
TGA
Ser
>WENV180925748
ODTL01000192
52358
Bacteroidota
TGA
Ser
>WENV180925796
ODTL01000256
52358
Bacteroidota
TGA
Ser
>WENV180925912
ODTL01000537
52358
Bacteroidota
TGA
Ser
>WENV180926167
ODTL01001789
52358
Bacteroidota
TGA
Ser
>WENV180926360
ODTL01004201
52358
Bacteroidota
TGA
Ser
>WENV180926432
ODTL01005989
52358
Bacteroidota
TGA
Ser
>WENV180925817
ODTL01000312
154643
Bacteroidota
CAT
Met
>WENV180926236
ODTL01002584
144590
Bacteroidota
GTT
Asn
>WENV180926842
ODTL01057980
144590
Bacteroidota
GTT
Asn
>WENV180925729
ODTL01000160
95559
Bacteroidota
TAG
Leu
>WENV180925549
ODTL01000011
419272
Bacteroidota
CTG
Gln
>WENV180925674
ODTL01000100
144655
Bacteroidota
GGC
Ala
>WENV180925828
ODTL01000343
338164
Bacteroidota
TTC
Glu
>WENV180925829
ODTL01000343
338164
Bacteroidota
TTC
Glu
>WENV180925686
ODTL01000113
95875
Bacteroidota
TAG
Leu
>WENV180925875
ODTL01000413
95875
Bacteroidota
TAG
Leu
>WENV180925547
ODTL01000011
139743
Bacteroidota
GGG
Pro
>WENV180925564
ODTL01000017
139743
Bacteroidota
GGG
Pro
>WENV180925565
ODTL01000018
139743
Bacteroidota
GGG
Pro
>WENV180926555
ODTL01010844
139743
Bacteroidota
GGG
Pro
>WENV180925698
ODTL01000127
240012
Bacteroidota
CCC
Gly
>WENV180926020
ODTL01000823
240012
Bacteroidota
CCC
Gly
>WENV180925890
ODTL01000455
44852
Bacteroidota
TAA
Leu
>WENV180925699
ODTL01000127
147439
Bacteroidota
TCT
Arg
>WENV180926276
ODTL01003054
280513
Bacteroidota
TTT
Lys
>WENV180925809
ODTL01000286
411550
Bacteroidota
CTG
Gln
>WENV180925810
ODTL01000286
411550
Bacteroidota
CTG
Gln
>WENV180925558
ODTL01000015
338165
Bacteroidota
GGT
Thr
>WENV180926897
ODTL01080098
338165
Bacteroidota
GGT
Thr
>WENV180926690
ODTL01022963
19528
Bacteroidota
GGA
Ser
>WENV180925530
ODTL01000001
425638
Bacteroidota
CTG
Gln
>WENV180925563
ODTL01000017
425638
Bacteroidota
CTG
Gln
>WENV180925591
ODTL01000040
425638
Bacteroidota
CTG
Gln
>WENV180925868
ODTL01000400
425638
Bacteroidota
CTG
Gln
>WENV180926014
ODTL01000815
425638
Bacteroidota
CTG
Gln
>WENV180925704
ODTL01000139
239647
Bacteroidota
TTT
Lys
>WENV180925760
ODTL01000205
19317
Bacteroidota
GGA
Ser
>WENV180926036
ODTL01000925
353927
Bacteroidota
TTC
Glu
>WENV180925585
ODTL01000031
185921
Bacteroidota
GTC
Asp
>WENV180925838
ODTL01000350
185921
Bacteroidota
GTC
Asp
>WENV180925839
ODTL01000350
185921
Bacteroidota
GTC
Asp
>WENV180925998
ODTL01000761
185921
Bacteroidota
GTC
Asp
>WENV180926211
ODTL01002261
185921
Bacteroidota
GTC
Asp
>WENV180925819
ODTL01000318
23696
Bacteroidota
GCT
Ser
>WENV180926232
ODTL01002559
414426
Bacteroidota
CTG
Gln
>WENV180925953
ODTL01000605
16224
Bacteroidota
GGA
Ser
>WENV180925550
ODTL01000011
16220
Bacteroidota
GGA
Ser
>WENV180925535
ODTL01000004
338125
Bacteroidota
CCT
Arg
>WENV180925670
ODTL01000096
338125
Bacteroidota
CCT
Arg
>WENV180925570
ODTL01000021
235129
Bacteroidota
GCC
Gly
>WENV180925925
ODTL01000551
235129
Bacteroidota
GCC
Gly
>WENV180925927
ODTL01000551
235129
Bacteroidota
GCC
Gly
>WENV180925959
ODTL01000634
235129
Bacteroidota
GCC
Gly
>WENV180925961
ODTL01000634
235129
Bacteroidota
GCC
Gly
>WENV180926449
ODTL01006361
235129
Bacteroidota
GCC
Gly
>WENV180926158
ODTL01001725
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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