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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180953119
ODUI01009728
412480
Bacteroidota
>WENV180953252
ODUI01016387
95987
Bacteroidota
CAA
Leu
>WENV180952578
ODUI01000431
339412
Bacteroidota
GGT
Thr
>WENV180952806
ODUI01002609
339412
Bacteroidota
GGT
Thr
>WENV180952826
ODUI01002954
148097
Bacteroidota
TGG
Pro
>WENV180952974
ODUI01005272
237796
Bacteroidota
CGT
Thr
>WENV180953522
ODUI01048353
237796
Bacteroidota
CGT
Thr
>WENV180953651
ODUI01089080
237796
Bacteroidota
CGT
Thr
>WENV180952828
ODUI01002954
97336
Bacteroidota
CAG
Leu
>WENV180953612
ODUI01073413
97336
Bacteroidota
CAG
Leu
>WENV180953062
ODUI01007933
340120
Bacteroidota
CCT
Arg
>WENV180953396
ODUI01027904
340120
Bacteroidota
CCT
Arg
>WENV180952703
ODUI01001392
340120
Bacteroidota
CCT
Arg
>WENV180952779
ODUI01002198
340120
Bacteroidota
CCT
Arg
>WENV180952878
ODUI01003330
340120
Bacteroidota
CCT
Arg
>WENV180953123
ODUI01009973
413663
Bacteroidota
CTG
Gln
>WENV180953044
ODUI01007261
136244
Bacteroidota
TAC
Val
>WENV180953679
ODUI01107123
136244
Bacteroidota
TAC
Val
>WENV180953789
ODUI01181483
136244
Bacteroidota
TAC
Val
>WENV180953795
ODUI01182238
136244
Bacteroidota
TAC
Val
>WENV180952807
ODUI01002609
237797
Bacteroidota
CCA
Trp
>WENV180952774
ODUI01002130
148096
Bacteroidota
GTG
His
>WENV180953526
ODUI01049871
148096
Bacteroidota
GTG
His
>WENV180952573
ODUI01000416
144695
Bacteroidota
CAT
Met
>WENV180953357
ODUI01023399
413952
Bacteroidota
>WENV180952832
ODUI01002965
238811
Bacteroidota
CAT
Met
>WENV180953136
ODUI01010651
238811
Bacteroidota
CAT
Met
>WENV180952927
ODUI01004179
412479
Bacteroidota
TTG
Gln
>WENV180952976
ODUI01005283
412479
Bacteroidota
TTG
Gln
>WENV180952977
ODUI01005293
412479
Bacteroidota
TTG
Gln
>WENV180953192
ODUI01013411
412479
Bacteroidota
TTG
Gln
>WENV180953430
ODUI01032179
412479
Bacteroidota
TTG
Gln
>WENV180952716
ODUI01001514
155123
Bacteroidota
GTT
Asn
>WENV180952935
ODUI01004439
155123
Bacteroidota
GTT
Asn
>WENV180953280
ODUI01017753
155123
Bacteroidota
GTT
Asn
>WENV180953281
ODUI01017753
155123
Bacteroidota
GTT
Asn
>WENV180953792
ODUI01181770
155123
Bacteroidota
GTT
Asn
>WENV180952674
ODUI01001173
238810
Bacteroidota
CGG
Pro
>WENV180953032
ODUI01006828
238810
Bacteroidota
CGG
Pro
>WENV180952566
ODUI01000341
127253
Bacteroidota
GGG
Pro
>WENV180952666
ODUI01001034
37076
Bacteroidota
TAA
Leu
>WENV180952964
ODUI01005046
37076
Bacteroidota
TAA
Leu
>WENV180953777
ODUI01174994
37076
Bacteroidota
TAA
Leu
>WENV180953714
ODUI01134708
191087
Bacteroidota
TCT
Arg
>WENV180953727
ODUI01147091
37794
Bacteroidota
TAA
Leu
>WENV180953110
ODUI01009527
339634
Bacteroidota
CCT
Arg
>WENV180953022
ODUI01006471
53439
Bacteroidota
TGA
Ser
>WENV180953077
ODUI01008404
136207
Bacteroidota
TAC
Val
>WENV180953685
ODUI01116228
171336
Bacteroidota
GGC
Ala
>WENV180953609
ODUI01073268
81773
Bacteroidota
CAG
Leu
>WENV180952589
ODUI01000522
96147
Bacteroidota
TAG
Leu
>WENV180953783
ODUI01179489
96147
Bacteroidota
TAG
Leu
>WENV180953570
ODUI01064305
16898
Bacteroidota
GGA
Ser
>WENV180953738
ODUI01154891
148247
Bacteroidota
TGC
Ala
>WENV180953057
ODUI01007777
344769
Bacteroidota
CTC
Glu
>WENV180953058
ODUI01007777
344769
Bacteroidota
CTC
Glu
>WENV180953284
ODUI01017857
344769
Bacteroidota
CTC
Glu
>WENV180953534
ODUI01053950
344769
Bacteroidota
CTC
Glu
>WENV180953560
ODUI01061596
339996
Bacteroidota
TTC
Glu
>WENV180952718
ODUI01001526
147148
Bacteroidota
CAT
Met
>WENV180953482
ODUI01041600
175704
Bacteroidota
TGC
Ala
>WENV180952729
ODUI01001583
419272
Bacteroidota
CTG
Gln
>WENV180952794
ODUI01002374
419272
Bacteroidota
CTG
Gln
>WENV180953071
ODUI01008058
59182
Bacteroidota
GAG
Leu
>WENV180953243
ODUI01016114
144639
Bacteroidota
GGC
Ala
>WENV180953151
ODUI01011047
151121
Bacteroidota
CAT
Met
>WENV180953635
ODUI01080366
139743
Bacteroidota
GGG
Pro
>WENV180953393
ODUI01027299
240012
Bacteroidota
CCC
Gly
>WENV180953340
ODUI01021338
127951
Bacteroidota
TAC
Val
>WENV180952805
ODUI01002609
95986
Bacteroidota
GTA
Tyr
>WENV180952888
ODUI01003424
95986
Bacteroidota
GTA
Tyr
>WENV180952893
ODUI01003536
16494
Bacteroidota
GGA
Ser
>WENV180952789
ODUI01002316
196394
Bacteroidota
GTC
Asp
>WENV180952790
ODUI01002316
196394
Bacteroidota
GTC
Asp
>WENV180952791
ODUI01002326
196394
Bacteroidota
GTC
Asp
>WENV180952734
ODUI01001662
146762
Bacteroidota
TGG
Pro
>WENV180952975
ODUI01005272
412236
Bacteroidota
CCC
Gly
>WENV180952829
ODUI01002954
59498
Bacteroidota
GAG
Leu
>WENV180953426
ODUI01030900
59498
Bacteroidota
GAG
Leu
>WENV180953457
ODUI01035868
59498
Bacteroidota
GAG
Leu
>WENV180953613
ODUI01073413
59498
Bacteroidota
GAG
Leu
>WENV180953417
ODUI01029879
302002
Bacteroidota
CGT
Thr
>WENV180953479
ODUI01041491
235129
Bacteroidota
GCC
Gly
>WENV180952611
ODUI01000671
313363
Bacteroidota
GAA
Phe
>WENV180952615
ODUI01000682
313363
Bacteroidota
GAA
Phe
>WENV180952756
ODUI01001951
313363
Bacteroidota
GAA
Phe
>WENV180952886
ODUI01003412
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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