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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180963600
ODUN01277438
246701
Verrucomicrobiota
TTT
Lys
>WENV180963411
ODUN01156637
345133
Verrucomicrobiota
GAC
Val
>WENV180963164
ODUN01077348
344844
Verrucomicrobiota
GCA
Cys
>WENV180963562
ODUN01251548
414625
Verrucomicrobiota
CCC
Gly
>WENV180963289
ODUN01114237
60880
Verrucomicrobiota
CAG
Leu
>WENV180963334
ODUN01130655
82056
Verrucomicrobiota
TAA
Leu
>WENV180963381
ODUN01144701
170105
Verrucomicrobiota
CAT
Met
>WENV180963432
ODUN01171914
155268
Verrucomicrobiota
CGG
Pro
>WENV180963403
ODUN01153800
345119
Verrucomicrobiota
TAC
Val
>WENV180963240
ODUN01094338
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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