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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180979165
ODVC01000025
411654
Campylobacterota
GCA
Cys
>WENV180979533
ODVC01000274
96088
Campylobacterota
GTA
Tyr
>WENV180979198
ODVC01000038
170960
Campylobacterota
TCG
Arg
>WENV180979721
ODVC01000943
170960
Campylobacterota
TCG
Arg
>WENV180979530
ODVC01000273
44891
Campylobacterota
TGA
Ser
>WENV180979782
ODVC01001911
193571
Campylobacterota
CAT
Met
>WENV180979111
ODVC01000012
20245
Campylobacterota
GCT
Ser
>WENV180979271
ODVC01000061
20245
Campylobacterota
GCT
Ser
>WENV180979172
ODVC01000029
238560
Campylobacterota
TTT
Lys
>WENV180979162
ODVC01000025
243184
Campylobacterota
GAC
Val
>WENV180979196
ODVC01000038
127212
Campylobacterota
TGG
Pro
>WENV180979535
ODVC01000274
338365
Campylobacterota
GGT
Thr
>WENV180979238
ODVC01000050
338365
Campylobacterota
GGT
Thr
>WENV180979943
ODVC01017107
353400
Campylobacterota
CTC
Glu
>WENV180979173
ODVC01000029
298002
Campylobacterota
>WENV180979390
ODVC01000133
146879
Campylobacterota
CAT
Met
>WENV180979575
ODVC01000334
146879
Campylobacterota
CAT
Met
>WENV180979722
ODVC01000943
187751
Campylobacterota
TCT
Arg
>WENV180979163
ODVC01000025
397111
Campylobacterota
GCC
Gly
>WENV180979354
ODVC01000095
397111
Campylobacterota
GCC
Gly
>WENV180979366
ODVC01000106
397111
Campylobacterota
GCC
Gly
>WENV180979527
ODVC01000273
397111
Campylobacterota
GCC
Gly
>WENV180979164
ODVC01000025
60256
Campylobacterota
TAA
Leu
>WENV180979528
ODVC01000273
60256
Campylobacterota
TAA
Leu
>WENV180979235
ODVC01000050
235424
Campylobacterota
TGT
Thr
>WENV180979195
ODVC01000038
379309
Campylobacterota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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