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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180981033
ODVE01005494
81880
Gammaproteobacteria
GAG
Leu
>WENV180981420
ODVE01021265
81880
Gammaproteobacteria
GAG
Leu
>WENV180981736
ODVE01051758
401437
Gammaproteobacteria
TTG
Gln
>WENV180981041
ODVE01005706
30640
Gammaproteobacteria
GGA
Ser
>WENV180981074
ODVE01006438
238438
Gammaproteobacteria
>WENV180981075
ODVE01006438
238438
Gammaproteobacteria
>WENV180982345
ODVE01315594
238438
Gammaproteobacteria
>WENV180981366
ODVE01018471
103428
Gammaproteobacteria
TAG
Leu
>WENV180981765
ODVE01058568
3276
Gammaproteobacteria
>WENV180981598
ODVE01034720
145168
Gammaproteobacteria
CAT
Met
>WENV180981825
ODVE01069430
150561
Gammaproteobacteria
ACG
Arg
>WENV180981406
ODVE01020338
397091
Gammaproteobacteria
TTG
Gln
>WENV180981190
ODVE01009641
339913
Gammaproteobacteria
TTT
Lys
>WENV180981764
ODVE01057101
339913
Gammaproteobacteria
TTT
Lys
>WENV180981876
ODVE01078915
339913
Gammaproteobacteria
TTT
Lys
>WENV180982073
ODVE01136287
358575
Gammaproteobacteria
TCC
Gly
>WENV180981592
ODVE01033502
58828
Gammaproteobacteria
TAA
Leu
>WENV180981879
ODVE01079633
268376
Gammaproteobacteria
CTT
Lys
>WENV180981448
ODVE01022824
147499
Gammaproteobacteria
CTT
Lys
>WENV180981115
ODVE01007250
4379
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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