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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181001195
ODVV01013718
196621
Bacillota
GTC
Asp
>WENV181001170
ODVV01010669
155958
Bacillota
GAT
Ile
>WENV181001301
ODVV01031179
144612
Bacillota
TCT
Arg
>WENV181001231
ODVV01020628
235098
Bacillota
GAC
Val
>WENV181001191
ODVV01013463
338152
Bacillota
TTC
Glu
>WENV181000951
ODVV01002762
148239
Bacillota
TCT
Arg
>WENV181001275
ODVV01026626
44854
Bacillota
TGA
Ser
>WENV181001429
ODVV01114348
37071
Bacillota
TGA
Ser
>WENV181000894
ODVV01001940
59312
Bacillota
CAG
Leu
>WENV181000963
ODVV01003007
59312
Bacillota
CAG
Leu
>WENV181001459
ODVV01118044
238910
Bacillota
CTT
Lys
>WENV181000877
ODVV01001757
338147
Bacillota
CTC
Glu
>WENV181001113
ODVV01007753
338147
Bacillota
CTC
Glu
>WENV181001047
ODVV01004736
235150
Bacillota
TGC
Ala
>WENV181000941
ODVV01002618
155273
Bacillota
CAT
Met
>WENV181001209
ODVV01016156
235137
Bacillota
TGC
Ala
>WENV181001213
ODVV01016327
429429
Bacillota
CCA
Trp
>WENV181001234
ODVV01021132
313454
Bacillota
GAA
Phe
>WENV181001431
ODVV01114484
44859
Bacillota
AAG
Leu
>WENV181001371
ODVV01065072
11034
Bacillota
GGA
Ser
>WENV181001194
ODVV01013718
235117
Bacillota
TAC
Val
>WENV181001375
ODVV01069070
274189
Bacillota
TGT
Thr
>WENV181001109
ODVV01007681
235079
Bacillota
GAA
Phe
>WENV181001064
ODVV01005591
173314
Bacillota
GAT
Ile
>WENV181001033
ODVV01004477
155089
Bacillota
CAT
Met
>WENV181001362
ODVV01058799
201704
Bacillota
GAT
Ile
>WENV181001289
ODVV01028950
144599
Bacillota
GTC
Asp
>WENV181001172
ODVV01011343
100326
Bacillota
GTA
Tyr
>WENV181000952
ODVV01002762
144610
Bacillota
GTG
His
>WENV181001278
ODVV01027581
411547
Bacillota
CTG
Gln
>WENV181001455
ODVV01118020
263765
Bacillota
TAC
Val
>WENV181000711
ODVV01000630
263765
Bacillota
TAC
Val
>WENV181001196
ODVV01013718
235095
Bacillota
GGT
Thr
>WENV181001420
ODVV01104865
239832
Bacillota
TGT
Thr
>WENV181001307
ODVV01033848
411549
Bacillota
TTG
Gln
>WENV181000845
ODVV01001473
235142
Bacillota
CTT
Lys
>WENV181000907
ODVV01002112
235142
Bacillota
CTT
Lys
>WENV181001202
ODVV01014892
148188
Bacillota
CCG
Arg
>WENV181001311
ODVV01034603
80612
Bacillota
GTA
Tyr
>WENV181000834
ODVV01001353
256380
Bacillota
>WENV181001100
ODVV01007378
157838
Bacillota
GTC
Asp
>WENV181001331
ODVV01040559
157838
Bacillota
GTC
Asp
>WENV181001131
ODVV01008682
144583
Bacillota
ACG
Arg
>WENV181001180
ODVV01012052
144652
Bacillota
GTC
Asp
>WENV181001054
ODVV01005135
247734
Bacillota
TGC
Ala
>WENV181001174
ODVV01011343
238974
Bacillota
GAA
Phe
>WENV181001187
ODVV01012340
238974
Bacillota
GAA
Phe
>WENV181000939
ODVV01002557
235113
Bacillota
GAA
Phe
>WENV181001185
ODVV01012052
235113
Bacillota
GAA
Phe
>WENV181001329
ODVV01040396
58712
Bacillota
CAG
Leu
>WENV181001198
ODVV01014407
299139
Bacillota
TGC
Ala
>WENV181001183
ODVV01012052
95563
Bacillota
GTA
Tyr
>WENV181000915
ODVV01002244
414486
Bacillota
CCC
Gly
>WENV181001024
ODVV01004161
114075
Bacillota
TAG
Leu
>WENV181001226
ODVV01018932
292012
Bacillota
TGC
Ala
>WENV181001004
ODVV01003563
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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