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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181013625
ODWN01002087
243647
Bacillota
TTT
Lys
>WENV181014280
ODWN01026542
243647
Bacillota
TTT
Lys
>WENV181013494
ODWN01000978
178679
Bacillota
CAT
Met
>WENV181013366
ODWN01000470
16842
Bacillota
CGA
Ser
>WENV181013413
ODWN01000568
16842
Bacillota
CGA
Ser
>WENV181014249
ODWN01023658
342730
Bacillota
CTC
Glu
>WENV181013674
ODWN01002507
267649
Bacillota
TAC
Val
>WENV181013698
ODWN01002780
267649
Bacillota
TAC
Val
>WENV181013784
ODWN01003869
267649
Bacillota
TAC
Val
>WENV181013590
ODWN01001717
246392
Bacillota
GTT
Asn
>WENV181014030
ODWN01010363
37549
Bacillota
TAA
Leu
>WENV181013975
ODWN01008217
148348
Bacillota
GTC
Asp
>WENV181014583
ODWN01086513
243099
Bacillota
GTT
Asn
>WENV181013518
ODWN01001129
243119
Bacillota
CTT
Lys
>WENV181014495
ODWN01057846
235150
Bacillota
TGC
Ala
>WENV181014508
ODWN01062026
235150
Bacillota
TGC
Ala
>WENV181014560
ODWN01075975
235150
Bacillota
TGC
Ala
>WENV181014626
ODWN01113139
235150
Bacillota
TGC
Ala
>WENV181013559
ODWN01001497
152047
Bacillota
GGG
Pro
>WENV181014419
ODWN01044457
235137
Bacillota
TGC
Ala
>WENV181013728
ODWN01003183
241761
Bacillota
TAC
Val
>WENV181013974
ODWN01008217
241761
Bacillota
TAC
Val
>WENV181014647
ODWN01133649
241761
Bacillota
TAC
Val
>WENV181013616
ODWN01002034
16834
Bacillota
GCT
Ser
>WENV181014158
ODWN01016586
16834
Bacillota
GCT
Ser
>WENV181014547
ODWN01068670
16834
Bacillota
GCT
Ser
>WENV181013624
ODWN01002087
243646
Bacillota
GTT
Asn
>WENV181013629
ODWN01002087
243646
Bacillota
GTT
Asn
>WENV181014037
ODWN01010625
243646
Bacillota
GTT
Asn
>WENV181014076
ODWN01012071
114002
Bacillota
CAA
Leu
>WENV181013935
ODWN01006541
342736
Bacillota
TTG
Gln
>WENV181013141
ODWN01000028
37437
Bacillota
TAA
Leu
>WENV181014014
ODWN01009656
37437
Bacillota
TAA
Leu
>WENV181014640
ODWN01125032
37437
Bacillota
TAA
Leu
>WENV181013724
ODWN01003183
296878
Bacillota
GTT
Asn
>WENV181013984
ODWN01008294
296878
Bacillota
GTT
Asn
>WENV181014087
ODWN01012488
296878
Bacillota
GTT
Asn
>WENV181014279
ODWN01026542
296878
Bacillota
GTT
Asn
>WENV181014284
ODWN01026542
296878
Bacillota
GTT
Asn
>WENV181014678
ODWN01151827
296878
Bacillota
GTT
Asn
>WENV181013723
ODWN01003183
340265
Bacillota
GCC
Gly
>WENV181014694
ODWN01167914
340265
Bacillota
GCC
Gly
>WENV181013492
ODWN01000978
162028
Bacillota
ACG
Arg
>WENV181013360
ODWN01000449
113951
Bacillota
GTA
Tyr
>WENV181013500
ODWN01000978
113951
Bacillota
GTA
Tyr
>WENV181013627
ODWN01002087
243612
Bacillota
TAC
Val
>WENV181013631
ODWN01002087
243612
Bacillota
TAC
Val
>WENV181013986
ODWN01008294
243612
Bacillota
TAC
Val
>WENV181014039
ODWN01010625
243612
Bacillota
TAC
Val
>WENV181014089
ODWN01012488
243612
Bacillota
TAC
Val
>WENV181014282
ODWN01026542
243612
Bacillota
TAC
Val
>WENV181014673
ODWN01148645
243612
Bacillota
TAC
Val
>WENV181014332
ODWN01032328
199366
Bacillota
CAT
Met
>WENV181013589
ODWN01001715
155089
Bacillota
CAT
Met
>WENV181013761
ODWN01003636
145068
Bacillota
>WENV181013664
ODWN01002378
37551
Bacillota
CGA
Ser
>WENV181014213
ODWN01021034
341796
Bacillota
CCG
Arg
>WENV181013976
ODWN01008217
286137
Bacillota
GAA
Phe
>WENV181014331
ODWN01032328
81373
Bacillota
GTA
Tyr
>WENV181014675
ODWN01149851
81373
Bacillota
GTA
Tyr
>WENV181014426
ODWN01045365
147135
Bacillota
ACG
Arg
>WENV181013721
ODWN01003128
148268
Bacillota
CGG
Pro
>WENV181013351
ODWN01000443
242848
Bacillota
GAA
Phe
>WENV181013498
ODWN01000978
242848
Bacillota
GAA
Phe
>WENV181013160
ODWN01000051
342895
Bacillota
CAT
Met
>WENV181013468
ODWN01000865
18852
Bacillota
GCT
Ser
>WENV181014029
ODWN01010363
419945
Bacillota
GCA
Cys
>WENV181013547
ODWN01001385
194150
Bacillota
TGG
Pro
>WENV181014019
ODWN01009827
194150
Bacillota
TGG
Pro
>WENV181013301
ODWN01000258
185292
Bacillota
ACG
Arg
>WENV181014067
ODWN01011768
96694
Bacillota
TAG
Leu
>WENV181013790
ODWN01003883
152045
Bacillota
CAT
Met
>WENV181014556
ODWN01071346
235701
Bacillota
TTT
Lys
>WENV181013076
ODWN01000003
154711
Bacillota
TGG
Pro
>WENV181013077
ODWN01000003
154711
Bacillota
TGG
Pro
>WENV181013078
ODWN01000003
154711
Bacillota
TGG
Pro
>WENV181014562
ODWN01076715
152019
Bacillota
GAT
Ile
>WENV181013549
ODWN01001385
152046
Bacillota
TCT
Arg
>WENV181013864
ODWN01004658
237846
Bacillota
GCC
Gly
>WENV181014510
ODWN01062984
237846
Bacillota
GCC
Gly
>WENV181013137
ODWN01000028
235197
Bacillota
GTC
Asp
>WENV181014580
ODWN01086472
235197
Bacillota
GTC
Asp
>WENV181013139
ODWN01000028
368876
Bacillota
GCC
Gly
>WENV181013623
ODWN01002087
368876
Bacillota
GCC
Gly
>WENV181013628
ODWN01002087
368876
Bacillota
GCC
Gly
>WENV181014278
ODWN01026542
368876
Bacillota
GCC
Gly
>WENV181014283
ODWN01026542
368876
Bacillota
GCC
Gly
>WENV181013720
ODWN01003128
152051
Bacillota
ACG
Arg
>WENV181013980
ODWN01008217
84171
Bacillota
GAG
Leu
>WENV181013973
ODWN01008217
241526
Bacillota
CTT
Lys
>WENV181014035
ODWN01010610
243613
Bacillota
GTG
His
>WENV181013555
ODWN01001438
144672
Bacillota
TCT
Arg
>WENV181014379
ODWN01038255
127572
Bacillota
ACG
Arg
>WENV181013362
ODWN01000449
256920
Bacillota
TTT
Lys
>WENV181013488
ODWN01000978
256920
Bacillota
TTT
Lys
>WENV181014120
ODWN01014608
152491
Bacillota
CAT
Met
>WENV181014146
ODWN01016096
241638
Bacillota
GTG
His
>WENV181013191
ODWN01000079
178684
Bacillota
TGG
Pro
>WENV181013789
ODWN01003883
281472
Bacillota
GGT
Thr
>WENV181014119
ODWN01014608
281472
Bacillota
GGT
Thr
>WENV181014021
ODWN01009827
178024
Bacillota
TCT
Arg
>WENV181014025
ODWN01010157
413657
Bacillota
CCC
Gly
>WENV181014135
ODWN01015404
413657
Bacillota
CCC
Gly
>WENV181014617
ODWN01101856
152018
Bacillota
CCT
Arg
>WENV181014138
ODWN01015579
272488
Bacillota
GAA
Phe
>WENV181013981
ODWN01008217
81598
Bacillota
CAG
Leu
>WENV181013256
ODWN01000147
238945
Bacillota
GCC
Gly
>WENV181014173
ODWN01017993
238945
Bacillota
GCC
Gly
>WENV181014383
ODWN01038839
413179
Bacillota
CCC
Gly
>WENV181013523
ODWN01001180
273862
Bacillota
TGC
Ala
>WENV181014059
ODWN01011208
273862
Bacillota
TGC
Ala
>WENV181014036
ODWN01010610
343027
Bacillota
TTG
Gln
>WENV181013482
ODWN01000945
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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