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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181041187
ODXS01005655
411654
Campylobacterota
GCA
Cys
>WENV181041833
ODXS01052854
170960
Campylobacterota
TCG
Arg
>WENV181040618
ODXS01000334
44891
Campylobacterota
TGA
Ser
>WENV181041737
ODXS01035901
193571
Campylobacterota
CAT
Met
>WENV181040981
ODXS01002818
20245
Campylobacterota
GCT
Ser
>WENV181041407
ODXS01011598
20245
Campylobacterota
GCT
Ser
>WENV181041615
ODXS01023057
20245
Campylobacterota
GCT
Ser
>WENV181042037
ODXS01123233
238560
Campylobacterota
TTT
Lys
>WENV181041526
ODXS01016090
243184
Campylobacterota
GAC
Val
>WENV181041831
ODXS01052854
127212
Campylobacterota
TGG
Pro
>WENV181040615
ODXS01000334
355138
Campylobacterota
GCC
Gly
>WENV181040678
ODXS01000447
338365
Campylobacterota
GGT
Thr
>WENV181040616
ODXS01000334
81005
Campylobacterota
TAA
Leu
>WENV181042006
ODXS01105519
353400
Campylobacterota
CTC
Glu
>WENV181042038
ODXS01123233
298002
Campylobacterota
>WENV181041790
ODXS01041298
146879
Campylobacterota
CAT
Met
>WENV181041521
ODXS01015836
149516
Campylobacterota
CAT
Met
>WENV181040622
ODXS01000334
187751
Campylobacterota
TCT
Arg
>WENV181041185
ODXS01005655
397111
Campylobacterota
GCC
Gly
>WENV181041705
ODXS01031899
397111
Campylobacterota
GCC
Gly
>WENV181041186
ODXS01005655
60256
Campylobacterota
TAA
Leu
>WENV181041115
ODXS01004353
379309
Campylobacterota
TTC
Glu
>WENV181040621
ODXS01000334
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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