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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181047411
ODXZ01001194
24650
Bacillota
TAA
Leu
>WENV181047270
ODXZ01000183
267649
Bacillota
TAC
Val
>WENV181047324
ODXZ01000271
267649
Bacillota
TAC
Val
>WENV181047326
ODXZ01000271
267649
Bacillota
TAC
Val
>WENV181047243
ODXZ01000141
339890
Bacillota
TTG
Gln
>WENV181047169
ODXZ01000052
23769
Bacillota
TAA
Leu
>WENV181047522
ODXZ01013294
144577
Bacillota
GAT
Ile
>WENV181047447
ODXZ01004314
246023
Bacillota
TGC
Ala
>WENV181047449
ODXZ01004461
338143
Bacillota
CTC
Glu
>WENV181047525
ODXZ01014821
341763
Bacillota
CTC
Glu
>WENV181047596
ODXZ01042529
37083
Bacillota
TGA
Ser
>WENV181047580
ODXZ01033394
144668
Bacillota
GTC
Asp
>WENV181047480
ODXZ01007617
44859
Bacillota
AAG
Leu
>WENV181047571
ODXZ01031448
287000
Bacillota
GTT
Asn
>WENV181047465
ODXZ01005896
147684
Bacillota
ACG
Arg
>WENV181047293
ODXZ01000215
412387
Bacillota
GCA
Cys
>WENV181047294
ODXZ01000215
412387
Bacillota
GCA
Cys
>WENV181047360
ODXZ01000375
18852
Bacillota
GCT
Ser
>WENV181047421
ODXZ01001969
18852
Bacillota
GCT
Ser
>WENV181047630
ODXZ01065307
18852
Bacillota
GCT
Ser
>WENV181047548
ODXZ01022835
241471
Bacillota
TGC
Ala
>WENV181047549
ODXZ01024218
419639
Bacillota
GCA
Cys
>WENV181047429
ODXZ01003009
235142
Bacillota
CTT
Lys
>WENV181047275
ODXZ01000183
235127
Bacillota
TTT
Lys
>WENV181047399
ODXZ01000790
235127
Bacillota
TTT
Lys
>WENV181047436
ODXZ01003056
235127
Bacillota
TTT
Lys
>WENV181047433
ODXZ01003056
147674
Bacillota
TCT
Arg
>WENV181047467
ODXZ01006186
144672
Bacillota
TCT
Arg
>WENV181047626
ODXZ01061115
144652
Bacillota
GTC
Asp
>WENV181047595
ODXZ01042078
419877
Bacillota
TCC
Gly
>WENV181047629
ODXZ01063669
272992
Bacillota
CTT
Lys
>WENV181047618
ODXZ01056477
343021
Bacillota
CAT
Met
>WENV181047584
ODXZ01035486
414486
Bacillota
CCC
Gly
>WENV181047562
ODXZ01027687
152018
Bacillota
CCT
Arg
>WENV181047638
ODXZ01073565
272488
Bacillota
GAA
Phe
>WENV181047514
ODXZ01012241
238945
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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