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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181051997
ODYE01011489
48052
Fusobacteriota
TAA
Leu
>WENV181051836
ODYE01004300
159267
Fusobacteriota
CAT
Met
>WENV181051584
ODYE01000366
242888
Fusobacteriota
GTT
Asn
>WENV181051624
ODYE01000532
242888
Fusobacteriota
GTT
Asn
>WENV181051923
ODYE01008174
242888
Fusobacteriota
GTT
Asn
>WENV181052357
ODYE01146753
151858
Fusobacteriota
GAT
Ile
>WENV181051649
ODYE01000781
151860
Fusobacteriota
ACG
Arg
>WENV181051590
ODYE01000389
151857
Fusobacteriota
TCT
Arg
>WENV181051596
ODYE01000389
156827
Fusobacteriota
GTC
Asp
>WENV181051882
ODYE01006488
152483
Fusobacteriota
GTC
Asp
>WENV181051864
ODYE01005634
343015
Fusobacteriota
TTG
Gln
>WENV181051663
ODYE01000964
242889
Fusobacteriota
TGT
Thr
>WENV181051650
ODYE01000781
60218
Fusobacteriota
CAA
Leu
>WENV181052359
ODYE01147309
242891
Fusobacteriota
CTT
Lys
>WENV181051835
ODYE01004300
151855
Fusobacteriota
TGC
Ala
>WENV181051591
ODYE01000389
127801
Fusobacteriota
CAT
Met
>WENV181052209
ODYE01048593
154976
Fusobacteriota
TCG
Arg
>WENV181051588
ODYE01000389
267548
Fusobacteriota
TCC
Gly
>WENV181051603
ODYE01000425
267548
Fusobacteriota
TCC
Gly
>WENV181051604
ODYE01000425
242887
Fusobacteriota
GTG
His
>WENV181051602
ODYE01000425
151854
Fusobacteriota
TGG
Pro
>WENV181051751
ODYE01001922
151854
Fusobacteriota
TGG
Pro
>WENV181051589
ODYE01000389
248546
Fusobacteriota
TTT
Lys
>WENV181051605
ODYE01000425
248546
Fusobacteriota
TTT
Lys
>WENV181052321
ODYE01108862
415120
Fusobacteriota
GCA
Cys
>WENV181051865
ODYE01005646
37553
Fusobacteriota
GCT
Ser
>WENV181051593
ODYE01000389
113955
Fusobacteriota
>WENV181051959
ODYE01009612
246346
Fusobacteriota
TTT
Lys
>WENV181051586
ODYE01000389
45759
Fusobacteriota
TAA
Leu
>WENV181051606
ODYE01000425
113605
Fusobacteriota
TAG
Leu
>WENV181051834
ODYE01004300
113605
Fusobacteriota
TAG
Leu
>WENV181051592
ODYE01000389
346237
Fusobacteriota
TTC
Glu
>WENV181051664
ODYE01000964
346237
Fusobacteriota
TTC
Glu
>WENV181051568
ODYE01000280
151861
Fusobacteriota
CCT
Arg
>WENV181052216
ODYE01054907
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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