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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181062643
ODYO01000858
412480
Bacteroidota
>WENV181062663
ODYO01002204
95987
Bacteroidota
CAA
Leu
>WENV181062611
ODYO01000134
339412
Bacteroidota
GGT
Thr
>WENV181062739
ODYO01011718
148097
Bacteroidota
TGG
Pro
>WENV181062675
ODYO01003597
146761
Bacteroidota
GAT
Ile
>WENV181062759
ODYO01017587
97336
Bacteroidota
CAG
Leu
>WENV181062667
ODYO01002627
340120
Bacteroidota
CCT
Arg
>WENV181062673
ODYO01003225
340120
Bacteroidota
CCT
Arg
>WENV181062697
ODYO01006307
340120
Bacteroidota
CCT
Arg
>WENV181062728
ODYO01009267
413663
Bacteroidota
CTG
Gln
>WENV181062612
ODYO01000134
237797
Bacteroidota
CCA
Trp
>WENV181062745
ODYO01013283
148096
Bacteroidota
GTG
His
>WENV181062685
ODYO01004150
238811
Bacteroidota
CAT
Met
>WENV181062756
ODYO01016543
412479
Bacteroidota
TTG
Gln
>WENV181062653
ODYO01001416
155123
Bacteroidota
GTT
Asn
>WENV181062698
ODYO01007119
155123
Bacteroidota
GTT
Asn
>WENV181062722
ODYO01008364
155123
Bacteroidota
GTT
Asn
>WENV181062669
ODYO01002803
238810
Bacteroidota
CGG
Pro
>WENV181062797
ODYO01030893
193809
Bacteroidota
CAT
Met
>WENV181062614
ODYO01000157
127253
Bacteroidota
GGG
Pro
>WENV181062747
ODYO01014524
127253
Bacteroidota
GGG
Pro
>WENV181062748
ODYO01014691
46489
Bacteroidota
TGA
Ser
>WENV181062649
ODYO01001128
37076
Bacteroidota
TAA
Leu
>WENV181062661
ODYO01002155
37076
Bacteroidota
TAA
Leu
>WENV181062831
ODYO01042394
251266
Bacteroidota
CTT
Lys
>WENV181062765
ODYO01019297
339634
Bacteroidota
CCT
Arg
>WENV181062835
ODYO01048845
96109
Bacteroidota
TAG
Leu
>WENV181062735
ODYO01010949
96147
Bacteroidota
TAG
Leu
>WENV181062637
ODYO01000590
96147
Bacteroidota
TAG
Leu
>WENV181062693
ODYO01005874
235180
Bacteroidota
CCA
Trp
>WENV181062626
ODYO01000498
344769
Bacteroidota
CTC
Glu
>WENV181062730
ODYO01009497
339996
Bacteroidota
TTC
Glu
>WENV181062608
ODYO01000077
147148
Bacteroidota
CAT
Met
>WENV181062610
ODYO01000134
95986
Bacteroidota
GTA
Tyr
>WENV181062657
ODYO01001913
16494
Bacteroidota
GGA
Ser
>WENV181062674
ODYO01003502
238607
Bacteroidota
TTT
Lys
>WENV181062760
ODYO01017587
59498
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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