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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181078891
OEAS01000946
411654
Campylobacterota
GCA
Cys
>WENV181080647
OEAS01065690
411654
Campylobacterota
GCA
Cys
>WENV181081058
OEAS01120589
411654
Campylobacterota
GCA
Cys
>WENV181078892
OEAS01000946
23937
Campylobacterota
TGA
Ser
>WENV181080108
OEAS01027316
23937
Campylobacterota
TGA
Ser
>WENV181081496
OEAS01233648
170960
Campylobacterota
TCG
Arg
>WENV181080648
OEAS01065690
44891
Campylobacterota
TGA
Ser
>WENV181079883
OEAS01018442
193571
Campylobacterota
CAT
Met
>WENV181079907
OEAS01018999
193571
Campylobacterota
CAT
Met
>WENV181080196
OEAS01032376
193571
Campylobacterota
CAT
Met
>WENV181080695
OEAS01069386
193571
Campylobacterota
CAT
Met
>WENV181079923
OEAS01019354
20245
Campylobacterota
GCT
Ser
>WENV181080423
OEAS01046781
20245
Campylobacterota
GCT
Ser
>WENV181081509
OEAS01238781
238560
Campylobacterota
TTT
Lys
>WENV181079181
OEAS01002698
243184
Campylobacterota
GAC
Val
>WENV181079442
OEAS01006561
243184
Campylobacterota
GAC
Val
>WENV181079906
OEAS01018999
243184
Campylobacterota
GAC
Val
>WENV181080012
OEAS01022969
243184
Campylobacterota
GAC
Val
>WENV181081853
OEAS01434533
355138
Campylobacterota
GCC
Gly
>WENV181081751
OEAS01360132
338365
Campylobacterota
GGT
Thr
>WENV181079936
OEAS01019674
353400
Campylobacterota
CTC
Glu
>WENV181081510
OEAS01238781
298002
Campylobacterota
>WENV181078694
OEAS01000325
146879
Campylobacterota
CAT
Met
>WENV181079392
OEAS01005722
146879
Campylobacterota
CAT
Met
>WENV181079458
OEAS01006935
146879
Campylobacterota
CAT
Met
>WENV181079934
OEAS01019648
146879
Campylobacterota
CAT
Met
>WENV181081466
OEAS01218118
95644
Campylobacterota
GTA
Tyr
>WENV181081983
OEAS01526286
149516
Campylobacterota
CAT
Met
>WENV181078890
OEAS01000946
60256
Campylobacterota
TAA
Leu
>WENV181081057
OEAS01120589
60256
Campylobacterota
TAA
Leu
>WENV181078903
OEAS01000982
339980
Campylobacterota
CAT
Met
>WENV181079537
OEAS01008372
379309
Campylobacterota
TTC
Glu
>WENV181079317
OEAS01004578
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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