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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181091031
OEBC01009398
243647
Bacillota
TTT
Lys
>WENV181092189
OEBC01316488
178679
Bacillota
CAT
Met
>WENV181091016
OEBC01008888
16842
Bacillota
CGA
Ser
>WENV181091481
OEBC01038460
37213
Bacillota
TGA
Ser
>WENV181091165
OEBC01015612
342730
Bacillota
CTC
Glu
>WENV181090970
OEBC01007469
235693
Bacillota
GGT
Thr
>WENV181091388
OEBC01029819
148348
Bacillota
GTC
Asp
>WENV181091701
OEBC01072221
243099
Bacillota
GTT
Asn
>WENV181092016
OEBC01187285
235150
Bacillota
TGC
Ala
>WENV181092004
OEBC01177918
235137
Bacillota
TGC
Ala
>WENV181091511
OEBC01042625
241761
Bacillota
TAC
Val
>WENV181091877
OEBC01113810
353391
Bacillota
GCC
Gly
>WENV181091011
OEBC01008677
16834
Bacillota
GCT
Ser
>WENV181092262
OEBC01386809
268272
Bacillota
TGC
Ala
>WENV181091824
OEBC01098813
268272
Bacillota
TGC
Ala
>WENV181091513
OEBC01042625
239076
Bacillota
GAA
Phe
>WENV181092125
OEBC01255119
235697
Bacillota
GTT
Asn
>WENV181090495
OEBC01000735
114002
Bacillota
CAA
Leu
>WENV181090260
OEBC01000050
37437
Bacillota
TAA
Leu
>WENV181091208
OEBC01017493
340265
Bacillota
GCC
Gly
>WENV181091320
OEBC01025406
340265
Bacillota
GCC
Gly
>WENV181092139
OEBC01268029
144763
Bacillota
TGG
Pro
>WENV181092142
OEBC01269297
113951
Bacillota
GTA
Tyr
>WENV181090595
OEBC01001454
243612
Bacillota
TAC
Val
>WENV181091409
OEBC01031040
81382
Bacillota
GAG
Leu
>WENV181090303
OEBC01000127
341796
Bacillota
CCG
Arg
>WENV181091199
OEBC01016868
338676
Bacillota
CCG
Arg
>WENV181090277
OEBC01000081
81373
Bacillota
GTA
Tyr
>WENV181091054
OEBC01010272
81373
Bacillota
GTA
Tyr
>WENV181091340
OEBC01026775
147135
Bacillota
ACG
Arg
>WENV181090517
OEBC01000907
342895
Bacillota
CAT
Met
>WENV181092280
OEBC01392449
18852
Bacillota
GCT
Ser
>WENV181091679
OEBC01068865
241471
Bacillota
TGC
Ala
>WENV181091668
OEBC01067910
250349
Bacillota
GAA
Phe
>WENV181091775
OEBC01088071
250349
Bacillota
GAA
Phe
>WENV181090861
OEBC01005223
96694
Bacillota
TAG
Leu
>WENV181091680
OEBC01068865
152019
Bacillota
GAT
Ile
>WENV181091621
OEBC01059725
237846
Bacillota
GCC
Gly
>WENV181091774
OEBC01088071
235197
Bacillota
GTC
Asp
>WENV181092296
OEBC01404528
235197
Bacillota
GTC
Asp
>WENV181091741
OEBC01081159
84171
Bacillota
GAG
Leu
>WENV181091953
OEBC01153243
84171
Bacillota
GAG
Leu
>WENV181090279
OEBC01000081
241526
Bacillota
CTT
Lys
>WENV181091510
OEBC01042625
241526
Bacillota
CTT
Lys
>WENV181091728
OEBC01078292
147183
Bacillota
GTT
Asn
>WENV181091029
OEBC01009398
243613
Bacillota
GTG
His
>WENV181091328
OEBC01025717
127572
Bacillota
ACG
Arg
>WENV181091966
OEBC01159191
127572
Bacillota
ACG
Arg
>WENV181091874
OEBC01113483
421363
Bacillota
TCC
Gly
>WENV181090971
OEBC01007469
152491
Bacillota
CAT
Met
>WENV181090706
OEBC01002560
243098
Bacillota
GGT
Thr
>WENV181090894
OEBC01006028
241638
Bacillota
GTG
His
>WENV181092080
OEBC01226746
239078
Bacillota
TTT
Lys
>WENV181090967
OEBC01007469
273029
Bacillota
TGT
Thr
>WENV181091764
OEBC01085635
178024
Bacillota
TCT
Arg
>WENV181090297
OEBC01000116
413657
Bacillota
CCC
Gly
>WENV181091565
OEBC01049109
152018
Bacillota
CCT
Arg
>WENV181092010
OEBC01181413
81598
Bacillota
CAG
Leu
>WENV181091910
OEBC01127567
238945
Bacillota
GCC
Gly
>WENV181091030
OEBC01009398
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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