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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181093190
OEBW01000012
235097
Bacteroidota
TTT
Lys
>WENV181093222
OEBW01000041
235097
Bacteroidota
TTT
Lys
>WENV181093582
OEBW01003240
235102
Bacteroidota
CGT
Thr
>WENV181093295
OEBW01000167
144657
Bacteroidota
CGG
Pro
>WENV181093973
OEBW01048120
243025
Bacteroidota
CAT
Met
>WENV181093357
OEBW01000378
338155
Bacteroidota
CTC
Glu
>WENV181093790
OEBW01012064
153993
Bacteroidota
GAT
Ile
>WENV181093942
OEBW01036177
339341
Bacteroidota
GGT
Thr
>WENV181093266
OEBW01000119
343138
Bacteroidota
CCT
Arg
>WENV181093313
OEBW01000197
58715
Bacteroidota
GAG
Leu
>WENV181093777
OEBW01011449
46165
Bacteroidota
TGA
Ser
>WENV181093429
OEBW01000945
338486
Bacteroidota
CAT
Met
>WENV181093471
OEBW01001316
338486
Bacteroidota
CAT
Met
>WENV181094034
OEBW01073483
136244
Bacteroidota
TAC
Val
>WENV181094118
OEBW01121192
136244
Bacteroidota
TAC
Val
>WENV181093312
OEBW01000197
59689
Bacteroidota
CAG
Leu
>WENV181093373
OEBW01000471
59689
Bacteroidota
CAG
Leu
>WENV181093201
OEBW01000025
436206
Bacteroidota
TTG
Gln
>WENV181093409
OEBW01000752
436206
Bacteroidota
TTG
Gln
>WENV181093233
OEBW01000059
20893
Bacteroidota
GGA
Ser
>WENV181093490
OEBW01001613
20893
Bacteroidota
GGA
Ser
>WENV181093941
OEBW01035462
20893
Bacteroidota
GGA
Ser
>WENV181093703
OEBW01007548
155123
Bacteroidota
GTT
Asn
>WENV181093803
OEBW01013311
344692
Bacteroidota
GGT
Thr
>WENV181093239
OEBW01000072
145504
Bacteroidota
TGT
Thr
>WENV181093294
OEBW01000163
338124
Bacteroidota
CCG
Arg
>WENV181093315
OEBW01000208
338124
Bacteroidota
CCG
Arg
>WENV181093257
OEBW01000100
235203
Bacteroidota
TTT
Lys
>WENV181093512
OEBW01001819
235203
Bacteroidota
TTT
Lys
>WENV181093615
OEBW01004169
235203
Bacteroidota
TTT
Lys
>WENV181093328
OEBW01000264
126641
Bacteroidota
TAC
Val
>WENV181093464
OEBW01001185
126641
Bacteroidota
TAC
Val
>WENV181093218
OEBW01000037
338132
Bacteroidota
GCA
Cys
>WENV181093253
OEBW01000090
338132
Bacteroidota
GCA
Cys
>WENV181093264
OEBW01000112
338132
Bacteroidota
GCA
Cys
>WENV181093578
OEBW01003129
338132
Bacteroidota
GCA
Cys
>WENV181093605
OEBW01003906
338132
Bacteroidota
GCA
Cys
>WENV181093172
OEBW01000005
193809
Bacteroidota
CAT
Met
>WENV181093305
OEBW01000186
58714
Bacteroidota
CAA
Leu
>WENV181093325
OEBW01000256
235165
Bacteroidota
CCA
Trp
>WENV181093570
OEBW01003002
280660
Bacteroidota
CCA
Trp
>WENV181093194
OEBW01000016
301449
Bacteroidota
CGG
Pro
>WENV181093198
OEBW01000022
301449
Bacteroidota
CGG
Pro
>WENV181093757
OEBW01010433
301449
Bacteroidota
CGG
Pro
>WENV181093833
OEBW01016875
301449
Bacteroidota
CGG
Pro
>WENV181093307
OEBW01000190
144933
Bacteroidota
TCT
Arg
>WENV181093787
OEBW01011641
144933
Bacteroidota
TCT
Arg
>WENV181093620
OEBW01004271
303954
Bacteroidota
GCC
Gly
>WENV181093551
OEBW01002548
171336
Bacteroidota
GGC
Ala
>WENV181093216
OEBW01000036
144656
Bacteroidota
GTG
His
>WENV181093279
OEBW01000133
235207
Bacteroidota
CAT
Met
>WENV181093358
OEBW01000383
235207
Bacteroidota
CAT
Met
>WENV181093500
OEBW01001720
144659
Bacteroidota
GTG
His
>WENV181093296
OEBW01000167
235180
Bacteroidota
CCA
Trp
>WENV181093236
OEBW01000067
144596
Bacteroidota
GGC
Ala
>WENV181093317
OEBW01000224
144596
Bacteroidota
GGC
Ala
>WENV181093229
OEBW01000053
80607
Bacteroidota
GTA
Tyr
>WENV181093309
OEBW01000195
80607
Bacteroidota
GTA
Tyr
>WENV181093462
OEBW01001178
80607
Bacteroidota
GTA
Tyr
>WENV181093499
OEBW01001705
80607
Bacteroidota
GTA
Tyr
>WENV181093755
OEBW01010417
80607
Bacteroidota
GTA
Tyr
>WENV181093299
OEBW01000170
80614
Bacteroidota
>WENV181094117
OEBW01121146
80614
Bacteroidota
>WENV181093451
OEBW01001049
154643
Bacteroidota
CAT
Met
>WENV181094120
OEBW01121253
144590
Bacteroidota
GTT
Asn
>WENV181093379
OEBW01000499
95559
Bacteroidota
TAG
Leu
>WENV181093445
OEBW01000993
419272
Bacteroidota
CTG
Gln
>WENV181093275
OEBW01000131
144655
Bacteroidota
GGC
Ala
>WENV181093334
OEBW01000296
144639
Bacteroidota
GGC
Ala
>WENV181093822
OEBW01015348
263771
Bacteroidota
CTT
Lys
>WENV181093282
OEBW01000141
338164
Bacteroidota
TTC
Glu
>WENV181093283
OEBW01000141
338164
Bacteroidota
TTC
Glu
>WENV181093285
OEBW01000153
95875
Bacteroidota
TAG
Leu
>WENV181093415
OEBW01000787
95875
Bacteroidota
TAG
Leu
>WENV181093245
OEBW01000077
139743
Bacteroidota
GGG
Pro
>WENV181093388
OEBW01000530
139743
Bacteroidota
GGG
Pro
>WENV181093452
OEBW01001077
139743
Bacteroidota
GGG
Pro
>WENV181093535
OEBW01002209
139743
Bacteroidota
GGG
Pro
>WENV181093227
OEBW01000048
240012
Bacteroidota
CCC
Gly
>WENV181093538
OEBW01002271
240012
Bacteroidota
CCC
Gly
>WENV181093304
OEBW01000185
44852
Bacteroidota
TAA
Leu
>WENV181093354
OEBW01000357
44852
Bacteroidota
TAA
Leu
>WENV181093970
OEBW01044469
280513
Bacteroidota
TTT
Lys
>WENV181093319
OEBW01000246
150485
Bacteroidota
GTT
Asn
>WENV181093320
OEBW01000246
150485
Bacteroidota
GTT
Asn
>WENV181093566
OEBW01002855
19528
Bacteroidota
GGA
Ser
>WENV181093270
OEBW01000122
425638
Bacteroidota
CTG
Gln
>WENV181094106
OEBW01119653
425638
Bacteroidota
CTG
Gln
>WENV181093259
OEBW01000106
19317
Bacteroidota
GGA
Ser
>WENV181093377
OEBW01000478
19317
Bacteroidota
GGA
Ser
>WENV181093342
OEBW01000311
353927
Bacteroidota
TTC
Glu
>WENV181093343
OEBW01000311
353927
Bacteroidota
TTC
Glu
>WENV181093349
OEBW01000338
353927
Bacteroidota
TTC
Glu
>WENV181093549
OEBW01002508
353927
Bacteroidota
TTC
Glu
>WENV181093191
OEBW01000015
185921
Bacteroidota
GTC
Asp
>WENV181093192
OEBW01000015
185921
Bacteroidota
GTC
Asp
>WENV181093608
OEBW01003917
185921
Bacteroidota
GTC
Asp
>WENV181093995
OEBW01055553
185921
Bacteroidota
GTC
Asp
>WENV181093356
OEBW01000378
23696
Bacteroidota
GCT
Ser
>WENV181093404
OEBW01000724
23696
Bacteroidota
GCT
Ser
>WENV181094114
OEBW01120742
414426
Bacteroidota
CTG
Gln
>WENV181093669
OEBW01006180
342729
Bacteroidota
GGT
Thr
>WENV181093215
OEBW01000036
55270
Bacteroidota
TGA
Ser
>WENV181093231
OEBW01000057
55270
Bacteroidota
TGA
Ser
>WENV181093352
OEBW01000351
55270
Bacteroidota
TGA
Ser
>WENV181093371
OEBW01000462
55270
Bacteroidota
TGA
Ser
>WENV181093380
OEBW01000504
55270
Bacteroidota
TGA
Ser
>WENV181093705
OEBW01007645
55270
Bacteroidota
TGA
Ser
>WENV181093751
OEBW01010013
55270
Bacteroidota
TGA
Ser
>WENV181093217
OEBW01000036
16224
Bacteroidota
GGA
Ser
>WENV181093802
OEBW01013271
151960
Bacteroidota
GGC
Ala
>WENV181093322
OEBW01000252
16220
Bacteroidota
GGA
Ser
>WENV181093224
OEBW01000045
338125
Bacteroidota
CCT
Arg
>WENV181093730
OEBW01009118
338125
Bacteroidota
CCT
Arg
>WENV181093311
OEBW01000197
235129
Bacteroidota
GCC
Gly
>WENV181093519
OEBW01002024
235129
Bacteroidota
GCC
Gly
>WENV181094125
OEBW01121326
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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