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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181113820
OEEL01139585
242888
Fusobacteriota
GTT
Asn
>WENV181113811
OEEL01135837
151858
Fusobacteriota
GAT
Ile
>WENV181112289
OEEL01000348
151860
Fusobacteriota
ACG
Arg
>WENV181112612
OEEL01001660
151857
Fusobacteriota
TCT
Arg
>WENV181113153
OEEL01012939
144694
Fusobacteriota
CAT
Met
>WENV181112187
OEEL01000228
152483
Fusobacteriota
GTC
Asp
>WENV181112258
OEEL01000313
152483
Fusobacteriota
GTC
Asp
>WENV181113836
OEEL01148947
246241
Fusobacteriota
TGC
Ala
>WENV181112206
OEEL01000238
343015
Fusobacteriota
TTG
Gln
>WENV181112795
OEEL01003192
343015
Fusobacteriota
TTG
Gln
>WENV181113028
OEEL01009284
242889
Fusobacteriota
TGT
Thr
>WENV181113150
OEEL01012939
242889
Fusobacteriota
TGT
Thr
>WENV181112290
OEEL01000348
60218
Fusobacteriota
CAA
Leu
>WENV181113146
OEEL01012939
242891
Fusobacteriota
CTT
Lys
>WENV181113152
OEEL01012939
151855
Fusobacteriota
TGC
Ala
>WENV181112265
OEEL01000320
243606
Fusobacteriota
TTT
Lys
>WENV181113524
OEEL01036256
243606
Fusobacteriota
TTT
Lys
>WENV181112266
OEEL01000320
152485
Fusobacteriota
TCT
Arg
>WENV181113529
OEEL01036615
152485
Fusobacteriota
TCT
Arg
>WENV181112260
OEEL01000313
96990
Fusobacteriota
GTA
Tyr
>WENV181112614
OEEL01001660
342642
Fusobacteriota
TTC
Glu
>WENV181113029
OEEL01009284
342642
Fusobacteriota
TTC
Glu
>WENV181113147
OEEL01012939
342642
Fusobacteriota
TTC
Glu
>WENV181112613
OEEL01001660
127801
Fusobacteriota
CAT
Met
>WENV181112952
OEEL01006855
154976
Fusobacteriota
TCG
Arg
>WENV181113044
OEEL01009635
242887
Fusobacteriota
GTG
His
>WENV181112611
OEEL01001660
235188
Fusobacteriota
TTT
Lys
>WENV181113045
OEEL01009635
235188
Fusobacteriota
TTT
Lys
>WENV181112751
OEEL01002722
151854
Fusobacteriota
TGG
Pro
>WENV181112864
OEEL01004410
151854
Fusobacteriota
TGG
Pro
>WENV181113042
OEEL01009635
151854
Fusobacteriota
TGG
Pro
>WENV181112710
OEEL01002456
37553
Fusobacteriota
GCT
Ser
>WENV181112615
OEEL01001660
113955
Fusobacteriota
>WENV181112253
OEEL01000313
246346
Fusobacteriota
TTT
Lys
>WENV181113528
OEEL01036615
246346
Fusobacteriota
TTT
Lys
>WENV181112608
OEEL01001660
45759
Fusobacteriota
TAA
Leu
>WENV181113523
OEEL01036256
243596
Fusobacteriota
GTG
His
>WENV181113046
OEEL01009635
113605
Fusobacteriota
TAG
Leu
>WENV181113151
OEEL01012939
113605
Fusobacteriota
TAG
Leu
>WENV181112911
OEEL01005803
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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