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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181114699
OEEO01003222
243647
Bacillota
TTT
Lys
>WENV181115681
OEEO01216834
243647
Bacillota
TTT
Lys
>WENV181113982
OEEO01000029
178679
Bacillota
CAT
Met
>WENV181115457
OEEO01086891
16842
Bacillota
CGA
Ser
>WENV181114175
OEEO01000179
37213
Bacillota
TGA
Ser
>WENV181114460
OEEO01000822
37213
Bacillota
TGA
Ser
>WENV181114723
OEEO01003906
267649
Bacillota
TAC
Val
>WENV181114838
OEEO01007164
267649
Bacillota
TAC
Val
>WENV181115647
OEEO01203218
267649
Bacillota
TAC
Val
>WENV181114201
OEEO01000223
267556
Bacillota
TAC
Val
>WENV181115566
OEEO01139092
338152
Bacillota
TTC
Glu
>WENV181115144
OEEO01024899
356488
Bacillota
TGT
Thr
>WENV181115138
OEEO01024899
359540
Bacillota
GTT
Asn
>WENV181115495
OEEO01109171
148348
Bacillota
GTC
Asp
>WENV181115508
OEEO01113014
243099
Bacillota
GTT
Asn
>WENV181115143
OEEO01024899
162003
Bacillota
GTC
Asp
>WENV181115591
OEEO01149321
235150
Bacillota
TGC
Ala
>WENV181115146
OEEO01024899
114359
Bacillota
TAG
Leu
>WENV181115072
OEEO01018316
235137
Bacillota
TGC
Ala
>WENV181115097
OEEO01021053
235137
Bacillota
TGC
Ala
>WENV181114664
OEEO01002707
16834
Bacillota
GCT
Ser
>WENV181114916
OEEO01009553
16834
Bacillota
GCT
Ser
>WENV181115663
OEEO01205886
243646
Bacillota
GTT
Asn
>WENV181115668
OEEO01208214
243646
Bacillota
GTT
Asn
>WENV181114465
OEEO01000846
114002
Bacillota
CAA
Leu
>WENV181114521
OEEO01001332
114002
Bacillota
CAA
Leu
>WENV181115405
OEEO01069728
37437
Bacillota
TAA
Leu
>WENV181115270
OEEO01039099
162028
Bacillota
ACG
Arg
>WENV181113964
OEEO01000019
113951
Bacillota
GTA
Tyr
>WENV181113988
OEEO01000029
113951
Bacillota
GTA
Tyr
>WENV181114423
OEEO01000655
243612
Bacillota
TAC
Val
>WENV181114635
OEEO01002235
243612
Bacillota
TAC
Val
>WENV181114863
OEEO01007713
243612
Bacillota
TAC
Val
>WENV181115112
OEEO01022507
243612
Bacillota
TAC
Val
>WENV181115514
OEEO01114213
243612
Bacillota
TAC
Val
>WENV181115581
OEEO01146993
243612
Bacillota
TAC
Val
>WENV181115666
OEEO01206588
243612
Bacillota
TAC
Val
>WENV181115496
OEEO01109171
286137
Bacillota
GAA
Phe
>WENV181114481
OEEO01000953
147135
Bacillota
ACG
Arg
>WENV181113986
OEEO01000029
242848
Bacillota
GAA
Phe
>WENV181114059
OEEO01000068
242848
Bacillota
GAA
Phe
>WENV181114297
OEEO01000381
342895
Bacillota
CAT
Met
>WENV181114876
OEEO01008232
342895
Bacillota
CAT
Met
>WENV181114280
OEEO01000324
18852
Bacillota
GCT
Ser
>WENV181114398
OEEO01000577
194150
Bacillota
TGG
Pro
>WENV181114387
OEEO01000535
185292
Bacillota
ACG
Arg
>WENV181114529
OEEO01001393
185292
Bacillota
ACG
Arg
>WENV181114382
OEEO01000525
250349
Bacillota
GAA
Phe
>WENV181115402
OEEO01069728
250349
Bacillota
GAA
Phe
>WENV181115653
OEEO01204767
250349
Bacillota
GAA
Phe
>WENV181115346
OEEO01054246
235701
Bacillota
TTT
Lys
>WENV181115503
OEEO01112481
154711
Bacillota
TGG
Pro
>WENV181115638
OEEO01189681
152019
Bacillota
GAT
Ile
>WENV181115145
OEEO01024899
101142
Bacillota
GTA
Tyr
>WENV181114309
OEEO01000419
237846
Bacillota
GCC
Gly
>WENV181114513
OEEO01001254
237846
Bacillota
GCC
Gly
>WENV181114552
OEEO01001501
237846
Bacillota
GCC
Gly
>WENV181114381
OEEO01000525
235197
Bacillota
GTC
Asp
>WENV181115375
OEEO01060743
235197
Bacillota
GTC
Asp
>WENV181115401
OEEO01069728
235197
Bacillota
GTC
Asp
>WENV181115673
OEEO01212733
235197
Bacillota
GTC
Asp
>WENV181114466
OEEO01000865
368876
Bacillota
GCC
Gly
>WENV181114697
OEEO01003222
368876
Bacillota
GCC
Gly
>WENV181115403
OEEO01069728
368876
Bacillota
GCC
Gly
>WENV181115515
OEEO01114213
368876
Bacillota
GCC
Gly
>WENV181115582
OEEO01146993
368876
Bacillota
GCC
Gly
>WENV181115142
OEEO01024899
235288
Bacillota
TAC
Val
>WENV181115462
OEEO01087882
163753
Bacillota
TGG
Pro
>WENV181113969
OEEO01000019
147183
Bacillota
GTT
Asn
>WENV181114237
OEEO01000268
147183
Bacillota
GTT
Asn
>WENV181113961
OEEO01000019
147183
Bacillota
GTT
Asn
>WENV181115344
OEEO01054246
243613
Bacillota
GTG
His
>WENV181113966
OEEO01000019
256920
Bacillota
TTT
Lys
>WENV181115266
OEEO01039099
256920
Bacillota
TTT
Lys
>WENV181115029
OEEO01014495
152491
Bacillota
CAT
Met
>WENV181115025
OEEO01014495
273029
Bacillota
TGT
Thr
>WENV181115028
OEEO01014495
281472
Bacillota
GGT
Thr
>WENV181114400
OEEO01000577
178024
Bacillota
TCT
Arg
>WENV181115023
OEEO01013962
413657
Bacillota
CCC
Gly
>WENV181115621
OEEO01173762
272488
Bacillota
GAA
Phe
>WENV181115489
OEEO01106159
292012
Bacillota
TGC
Ala
>WENV181114467
OEEO01000865
287034
Bacillota
GTT
Asn
>WENV181114517
OEEO01001268
287034
Bacillota
GTT
Asn
>WENV181114633
OEEO01002235
287034
Bacillota
GTT
Asn
>WENV181114698
OEEO01003222
287034
Bacillota
GTT
Asn
>WENV181115345
OEEO01054246
343027
Bacillota
TTG
Gln
>WENV181114310
OEEO01000420
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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