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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181121804
OEFL01019663
81880
Gammaproteobacteria
GAG
Leu
>WENV181120935
OEFL01000012
30640
Gammaproteobacteria
GGA
Ser
>WENV181121144
OEFL01000726
238438
Gammaproteobacteria
>WENV181121145
OEFL01000726
238438
Gammaproteobacteria
>WENV181122063
OEFL01061518
424364
Gammaproteobacteria
CCA
Trp
>WENV181121273
OEFL01002027
3276
Gammaproteobacteria
>WENV181121328
OEFL01002381
145168
Gammaproteobacteria
CAT
Met
>WENV181121496
OEFL01005388
150561
Gammaproteobacteria
ACG
Arg
>WENV181121400
OEFL01003414
339913
Gammaproteobacteria
TTT
Lys
>WENV181121401
OEFL01003414
339913
Gammaproteobacteria
TTT
Lys
>WENV181121765
OEFL01018062
254333
Gammaproteobacteria
TGT
Thr
>WENV181121767
OEFL01018062
358575
Gammaproteobacteria
TCC
Gly
>WENV181121415
OEFL01003611
58828
Gammaproteobacteria
TAA
Leu
>WENV181121696
OEFL01015149
58828
Gammaproteobacteria
TAA
Leu
>WENV181121188
OEFL01001185
3278
Gammaproteobacteria
>WENV181121296
OEFL01002069
147499
Gammaproteobacteria
CTT
Lys
>WENV181121936
OEFL01033985
147499
Gammaproteobacteria
CTT
Lys
>WENV181120981
OEFL01000047
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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