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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181133306
OEGE01169797
235146
Actinomycetota
CGT
Thr
>WENV181132651
OEGE01007256
119475
Actinomycetota
TAA
Leu
>WENV181132643
OEGE01006963
235153
Actinomycetota
CCT
Arg
>WENV181133351
OEGE01198994
144589
Actinomycetota
ACG
Arg
>WENV181133187
OEGE01092283
16400
Actinomycetota
GAG
Leu
>WENV181132644
OEGE01007009
37070
Actinomycetota
CGA
Ser
>WENV181132573
OEGE01004288
245301
Actinomycetota
GCC
Gly
>WENV181132755
OEGE01014210
245301
Actinomycetota
GCC
Gly
>WENV181133237
OEGE01114968
411601
Actinomycetota
CCC
Gly
>WENV181133262
OEGE01139087
144826
Actinomycetota
GGG
Pro
>WENV181133171
OEGE01081895
338239
Actinomycetota
TTC
Glu
>WENV181132869
OEGE01024159
162208
Actinomycetota
TAC
Val
>WENV181133173
OEGE01084594
16219
Actinomycetota
GCT
Ser
>WENV181132798
OEGE01017511
235174
Actinomycetota
TGC
Ala
>WENV181133147
OEGE01074511
235101
Actinomycetota
TTT
Lys
>WENV181132786
OEGE01016326
153948
Actinomycetota
GGG
Pro
>WENV181133135
OEGE01070838
44862
Actinomycetota
CGA
Ser
>WENV181133259
OEGE01137555
254857
Actinomycetota
CCG
Arg
>WENV181132981
OEGE01037323
144593
Actinomycetota
TAT
Ile
>WENV181133004
OEGE01041014
144636
Actinomycetota
GAT
Ile
>WENV181132745
OEGE01013122
243671
Actinomycetota
CTC
Glu
>WENV181132987
OEGE01038709
243671
Actinomycetota
CTC
Glu
>WENV181132966
OEGE01035637
45147
Actinomycetota
CGA
Ser
>WENV181132746
OEGE01013122
338148
Actinomycetota
CTG
Gln
>WENV181132787
OEGE01016385
235148
Actinomycetota
GTT
Asn
>WENV181132788
OEGE01016385
235148
Actinomycetota
GTT
Asn
>WENV181133305
OEGE01169631
176456
Actinomycetota
TCT
Arg
>WENV181133323
OEGE01181801
144825
Actinomycetota
CAT
Met
>WENV181132768
OEGE01015070
338139
Actinomycetota
GTT
Asn
>WENV181132642
OEGE01006904
237794
Actinomycetota
CCG
Arg
>WENV181133021
OEGE01042673
411554
Actinomycetota
CCC
Gly
>WENV181132795
OEGE01016986
113601
Actinomycetota
TAG
Leu
>WENV181132711
OEGE01010187
144595
Actinomycetota
CAA
Leu
>WENV181132736
OEGE01012193
235149
Actinomycetota
CCT
Arg
>WENV181132753
OEGE01014192
414234
Actinomycetota
CTG
Gln
>WENV181132794
OEGE01016986
235121
Actinomycetota
CGT
Thr
>WENV181132802
OEGE01017547
235121
Actinomycetota
CGT
Thr
>WENV181132962
OEGE01034889
47164
Actinomycetota
GGA
Ser
>WENV181132698
OEGE01009451
144635
Actinomycetota
TGG
Pro
>WENV181132832
OEGE01019757
61501
Actinomycetota
CAG
Leu
>WENV181133346
OEGE01198860
238470
Actinomycetota
GTT
Asn
>WENV181133017
OEGE01042191
44851
Actinomycetota
TGA
Ser
>WENV181132872
OEGE01024586
163948
Actinomycetota
CAT
Met
>WENV181133340
OEGE01198419
235173
Actinomycetota
GGC
Ala
>WENV181132624
OEGE01006093
267574
Actinomycetota
CAC
Val
>WENV181132626
OEGE01006093
267574
Actinomycetota
CAC
Val
>WENV181133048
OEGE01049719
95593
Actinomycetota
>WENV181133065
OEGE01053403
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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