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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181150471
OEHW01002911
48052
Fusobacteriota
TAA
Leu
>WENV181151496
OEHW01060406
242888
Fusobacteriota
GTT
Asn
>WENV181151842
OEHW01168276
151858
Fusobacteriota
GAT
Ile
>WENV181150673
OEHW01004765
151860
Fusobacteriota
ACG
Arg
>WENV181150520
OEHW01003218
151857
Fusobacteriota
TCT
Arg
>WENV181150751
OEHW01006834
156827
Fusobacteriota
GTC
Asp
>WENV181150758
OEHW01006834
156827
Fusobacteriota
GTC
Asp
>WENV181150601
OEHW01003737
115931
Fusobacteriota
TAG
Leu
>WENV181150760
OEHW01006834
115931
Fusobacteriota
TAG
Leu
>WENV181150175
OEHW01000737
152483
Fusobacteriota
GTC
Asp
>WENV181151792
OEHW01142005
152483
Fusobacteriota
GTC
Asp
>WENV181151874
OEHW01185178
246241
Fusobacteriota
TGC
Ala
>WENV181151756
OEHW01129076
343015
Fusobacteriota
TTG
Gln
>WENV181150726
OEHW01006282
242889
Fusobacteriota
TGT
Thr
>WENV181150759
OEHW01006834
242889
Fusobacteriota
TGT
Thr
>WENV181150674
OEHW01004765
60218
Fusobacteriota
CAA
Leu
>WENV181150599
OEHW01003737
296648
Fusobacteriota
GTG
His
>WENV181150755
OEHW01006834
242891
Fusobacteriota
CTT
Lys
>WENV181150761
OEHW01006834
286115
Fusobacteriota
GCC
Gly
>WENV181151847
OEHW01169971
151855
Fusobacteriota
TGC
Ala
>WENV181151668
OEHW01092483
243606
Fusobacteriota
TTT
Lys
>WENV181150888
OEHW01010026
152485
Fusobacteriota
TCT
Arg
>WENV181150521
OEHW01003218
127801
Fusobacteriota
CAT
Met
>WENV181151791
OEHW01142005
243607
Fusobacteriota
TAC
Val
>WENV181150602
OEHW01003737
390517
Fusobacteriota
TTG
Gln
>WENV181150638
OEHW01004290
390517
Fusobacteriota
TTG
Gln
>WENV181150597
OEHW01003737
151854
Fusobacteriota
TGG
Pro
>WENV181150637
OEHW01004290
151854
Fusobacteriota
TGG
Pro
>WENV181150519
OEHW01003218
248546
Fusobacteriota
TTT
Lys
>WENV181150600
OEHW01003737
248546
Fusobacteriota
TTT
Lys
>WENV181150522
OEHW01003218
377837
Fusobacteriota
TTC
Glu
>WENV181150727
OEHW01006282
377837
Fusobacteriota
TTC
Glu
>WENV181150756
OEHW01006834
377837
Fusobacteriota
TTC
Glu
>WENV181150753
OEHW01006834
415120
Fusobacteriota
GCA
Cys
>WENV181150442
OEHW01002683
37553
Fusobacteriota
GCT
Ser
>WENV181150523
OEHW01003218
113955
Fusobacteriota
>WENV181150887
OEHW01010026
246346
Fusobacteriota
TTT
Lys
>WENV181151164
OEHW01024000
246346
Fusobacteriota
TTT
Lys
>WENV181150516
OEHW01003218
45759
Fusobacteriota
TAA
Leu
>WENV181150654
OEHW01004620
151861
Fusobacteriota
CCT
Arg
>WENV181151848
OEHW01169971
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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