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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181156145
OEIE01003981
159267
Fusobacteriota
CAT
Met
>WENV181156865
OEIE01178146
242888
Fusobacteriota
GTT
Asn
>WENV181156880
OEIE01179530
151858
Fusobacteriota
GAT
Ile
>WENV181155843
OEIE01000240
151860
Fusobacteriota
ACG
Arg
>WENV181156166
OEIE01004377
151857
Fusobacteriota
TCT
Arg
>WENV181156140
OEIE01003981
156827
Fusobacteriota
GTC
Asp
>WENV181156025
OEIE01001908
115931
Fusobacteriota
TAG
Leu
>WENV181156142
OEIE01003981
115931
Fusobacteriota
TAG
Leu
>WENV181156702
OEIE01066694
152483
Fusobacteriota
GTC
Asp
>WENV181156552
OEIE01029218
246241
Fusobacteriota
TGC
Ala
>WENV181156244
OEIE01006611
343015
Fusobacteriota
TTG
Gln
>WENV181155842
OEIE01000240
155082
Fusobacteriota
TCG
Arg
>WENV181156141
OEIE01003981
242889
Fusobacteriota
TGT
Thr
>WENV181156210
OEIE01005698
242889
Fusobacteriota
TGT
Thr
>WENV181156137
OEIE01003981
242891
Fusobacteriota
CTT
Lys
>WENV181156144
OEIE01003981
151855
Fusobacteriota
TGC
Ala
>WENV181156821
OEIE01131255
152485
Fusobacteriota
TCT
Arg
>WENV181156167
OEIE01004377
127801
Fusobacteriota
CAT
Met
>WENV181156745
OEIE01086701
154976
Fusobacteriota
TCG
Arg
>WENV181156022
OEIE01001908
267548
Fusobacteriota
TCC
Gly
>WENV181156136
OEIE01003981
267548
Fusobacteriota
TCC
Gly
>WENV181156164
OEIE01004377
267548
Fusobacteriota
TCC
Gly
>WENV181156023
OEIE01001908
242887
Fusobacteriota
GTG
His
>WENV181156021
OEIE01001908
151854
Fusobacteriota
TGG
Pro
>WENV181156230
OEIE01006229
151854
Fusobacteriota
TGG
Pro
>WENV181156024
OEIE01001908
248546
Fusobacteriota
TTT
Lys
>WENV181156165
OEIE01004377
248546
Fusobacteriota
TTT
Lys
>WENV181156135
OEIE01003981
415120
Fusobacteriota
GCA
Cys
>WENV181155976
OEIE01001318
37553
Fusobacteriota
GCT
Ser
>WENV181155975
OEIE01001318
113955
Fusobacteriota
>WENV181156169
OEIE01004377
113955
Fusobacteriota
>WENV181156242
OEIE01006571
246346
Fusobacteriota
TTT
Lys
>WENV181156162
OEIE01004377
45759
Fusobacteriota
TAA
Leu
>WENV181156138
OEIE01003981
346237
Fusobacteriota
TTC
Glu
>WENV181156168
OEIE01004377
346237
Fusobacteriota
TTC
Glu
>WENV181156211
OEIE01005698
346237
Fusobacteriota
TTC
Glu
>WENV181156317
OEIE01009393
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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