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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181156583
OEIE01032983
81880
Gammaproteobacteria
GAG
Leu
>WENV181155748
OEIE01000010
246818
Gammaproteobacteria
TTT
Lys
>WENV181156616
OEIE01037807
238438
Gammaproteobacteria
>WENV181156617
OEIE01037807
238438
Gammaproteobacteria
>WENV181156422
OEIE01015581
3276
Gammaproteobacteria
>WENV181156399
OEIE01013627
145168
Gammaproteobacteria
CAT
Met
>WENV181156477
OEIE01020149
23436
Gammaproteobacteria
GGA
Ser
>WENV181156872
OEIE01178712
150561
Gammaproteobacteria
ACG
Arg
>WENV181156817
OEIE01126176
339913
Gammaproteobacteria
TTT
Lys
>WENV181156308
OEIE01009148
254333
Gammaproteobacteria
TGT
Thr
>WENV181156118
OEIE01003595
188039
Gammaproteobacteria
CAT
Met
>WENV181156765
OEIE01101323
358575
Gammaproteobacteria
TCC
Gly
>WENV181156112
OEIE01003566
3278
Gammaproteobacteria
>WENV181156340
OEIE01010053
147498
Gammaproteobacteria
GAC
Val
>WENV181156085
OEIE01002937
268376
Gammaproteobacteria
CTT
Lys
>WENV181156228
OEIE01006184
147761
Gammaproteobacteria
TGG
Pro
>WENV181156389
OEIE01012942
147761
Gammaproteobacteria
TGG
Pro
>WENV181156436
OEIE01016988
147499
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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