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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181175579
OEJQ01007928
412480
Bacteroidota
>WENV181175344
OEJQ01000520
339412
Bacteroidota
GGT
Thr
>WENV181176030
OEJQ01129633
235102
Bacteroidota
CGT
Thr
>WENV181175407
OEJQ01001385
148097
Bacteroidota
TGG
Pro
>WENV181176042
OEJQ01137710
148097
Bacteroidota
TGG
Pro
>WENV181175308
OEJQ01000188
237796
Bacteroidota
CGT
Thr
>WENV181175356
OEJQ01000614
237796
Bacteroidota
CGT
Thr
>WENV181175756
OEJQ01029832
237796
Bacteroidota
CGT
Thr
>WENV181175532
OEJQ01005556
97336
Bacteroidota
CAG
Leu
>WENV181175339
OEJQ01000429
340120
Bacteroidota
CCT
Arg
>WENV181175369
OEJQ01000812
340120
Bacteroidota
CCT
Arg
>WENV181175387
OEJQ01001162
413663
Bacteroidota
CTG
Gln
>WENV181175545
OEJQ01006080
413663
Bacteroidota
CTG
Gln
>WENV181175643
OEJQ01012485
237797
Bacteroidota
CCA
Trp
>WENV181175976
OEJQ01092555
148096
Bacteroidota
GTG
His
>WENV181175258
OEJQ01000023
144695
Bacteroidota
CAT
Met
>WENV181175941
OEJQ01077164
144695
Bacteroidota
CAT
Met
>WENV181175922
OEJQ01070715
413952
Bacteroidota
>WENV181175439
OEJQ01001946
238811
Bacteroidota
CAT
Met
>WENV181175503
OEJQ01003797
238811
Bacteroidota
CAT
Met
>WENV181175822
OEJQ01044823
238811
Bacteroidota
CAT
Met
>WENV181175825
OEJQ01045572
238811
Bacteroidota
CAT
Met
>WENV181175395
OEJQ01001253
412479
Bacteroidota
TTG
Gln
>WENV181175745
OEJQ01027438
412479
Bacteroidota
TTG
Gln
>WENV181175318
OEJQ01000243
155123
Bacteroidota
GTT
Asn
>WENV181175487
OEJQ01002862
155123
Bacteroidota
GTT
Asn
>WENV181175594
OEJQ01008929
155123
Bacteroidota
GTT
Asn
>WENV181175629
OEJQ01011323
238810
Bacteroidota
CGG
Pro
>WENV181175316
OEJQ01000228
127253
Bacteroidota
GGG
Pro
>WENV181175381
OEJQ01000997
127253
Bacteroidota
GGG
Pro
>WENV181175438
OEJQ01001897
127253
Bacteroidota
GGG
Pro
>WENV181175306
OEJQ01000179
37076
Bacteroidota
TAA
Leu
>WENV181175368
OEJQ01000810
37076
Bacteroidota
TAA
Leu
>WENV181175469
OEJQ01002361
37076
Bacteroidota
TAA
Leu
>WENV181175766
OEJQ01032030
251266
Bacteroidota
CTT
Lys
>WENV181175931
OEJQ01074481
251266
Bacteroidota
CTT
Lys
>WENV181175583
OEJQ01007978
339634
Bacteroidota
CCT
Arg
>WENV181175804
OEJQ01040549
149691
Bacteroidota
GTT
Asn
>WENV181175956
OEJQ01083804
81773
Bacteroidota
CAG
Leu
>WENV181175528
OEJQ01005136
96147
Bacteroidota
TAG
Leu
>WENV181175798
OEJQ01039569
96147
Bacteroidota
TAG
Leu
>WENV181175304
OEJQ01000176
344769
Bacteroidota
CTC
Glu
>WENV181175305
OEJQ01000176
344769
Bacteroidota
CTC
Glu
>WENV181175338
OEJQ01000405
344769
Bacteroidota
CTC
Glu
>WENV181175729
OEJQ01025057
344769
Bacteroidota
CTC
Glu
>WENV181175702
OEJQ01020376
339996
Bacteroidota
TTC
Glu
>WENV181175428
OEJQ01001715
147148
Bacteroidota
CAT
Met
>WENV181175467
OEJQ01002343
147148
Bacteroidota
CAT
Met
>WENV181175295
OEJQ01000149
419272
Bacteroidota
CTG
Gln
>WENV181175796
OEJQ01038363
59182
Bacteroidota
GAG
Leu
>WENV181175918
OEJQ01068772
95875
Bacteroidota
TAG
Leu
>WENV181175708
OEJQ01020910
151121
Bacteroidota
CAT
Met
>WENV181175740
OEJQ01026618
244299
Bacteroidota
CGG
Pro
>WENV181175957
OEJQ01083804
60485
Bacteroidota
GAG
Leu
>WENV181175779
OEJQ01034946
127951
Bacteroidota
TAC
Val
>WENV181175343
OEJQ01000520
95986
Bacteroidota
GTA
Tyr
>WENV181175588
OEJQ01008411
95986
Bacteroidota
GTA
Tyr
>WENV181175742
OEJQ01027149
95986
Bacteroidota
GTA
Tyr
>WENV181175377
OEJQ01000910
16494
Bacteroidota
GGA
Ser
>WENV181175546
OEJQ01006233
16494
Bacteroidota
GGA
Ser
>WENV181175366
OEJQ01000759
238607
Bacteroidota
TTT
Lys
>WENV181175312
OEJQ01000206
146762
Bacteroidota
TGG
Pro
>WENV181175865
OEJQ01055080
146762
Bacteroidota
TGG
Pro
>WENV181175309
OEJQ01000188
412236
Bacteroidota
CCC
Gly
>WENV181175950
OEJQ01082090
412236
Bacteroidota
CCC
Gly
>WENV181175404
OEJQ01001326
146764
Bacteroidota
GTC
Asp
>WENV181175405
OEJQ01001326
146764
Bacteroidota
GTC
Asp
>WENV181175533
OEJQ01005556
59498
Bacteroidota
GAG
Leu
>WENV181175793
OEJQ01038363
59498
Bacteroidota
GAG
Leu
>WENV181175955
OEJQ01082956
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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