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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181183359
OEJW01000219
235097
Bacteroidota
TTT
Lys
>WENV181183565
OEJW01000989
144657
Bacteroidota
CGG
Pro
>WENV181183398
OEJW01000266
243025
Bacteroidota
CAT
Met
>WENV181183194
OEJW01000001
338155
Bacteroidota
CTC
Glu
>WENV181183337
OEJW01000169
338155
Bacteroidota
CTC
Glu
>WENV181183290
OEJW01000103
58715
Bacteroidota
GAG
Leu
>WENV181183372
OEJW01000235
17323
Bacteroidota
GGA
Ser
>WENV181183323
OEJW01000149
95618
Bacteroidota
TAG
Leu
>WENV181183274
OEJW01000080
338486
Bacteroidota
CAT
Met
>WENV181183205
OEJW01000003
411543
Bacteroidota
CTG
Gln
>WENV181183259
OEJW01000056
59689
Bacteroidota
CAG
Leu
>WENV181183289
OEJW01000103
59689
Bacteroidota
CAG
Leu
>WENV181183209
OEJW01000006
436206
Bacteroidota
TTG
Gln
>WENV181183214
OEJW01000008
436206
Bacteroidota
TTG
Gln
>WENV181183604
OEJW01001252
20893
Bacteroidota
GGA
Ser
>WENV181183400
OEJW01000272
344692
Bacteroidota
GGT
Thr
>WENV181183347
OEJW01000185
235182
Bacteroidota
>WENV181183477
OEJW01000528
272983
Bacteroidota
CGT
Thr
>WENV181183254
OEJW01000050
235203
Bacteroidota
TTT
Lys
>WENV181183269
OEJW01000075
235203
Bacteroidota
TTT
Lys
>WENV181183378
OEJW01000240
238121
Bacteroidota
CTT
Lys
>WENV181183379
OEJW01000240
238121
Bacteroidota
CTT
Lys
>WENV181183380
OEJW01000240
238121
Bacteroidota
CTT
Lys
>WENV181183218
OEJW01000012
338132
Bacteroidota
GCA
Cys
>WENV181183414
OEJW01000308
338132
Bacteroidota
GCA
Cys
>WENV181183484
OEJW01000567
338132
Bacteroidota
GCA
Cys
>WENV181183229
OEJW01000020
144688
Bacteroidota
CAT
Met
>WENV181183381
OEJW01000240
45423
Bacteroidota
TGA
Ser
>WENV181183236
OEJW01000028
181746
Bacteroidota
GGC
Ala
>WENV181183253
OEJW01000049
58714
Bacteroidota
CAA
Leu
>WENV181183301
OEJW01000112
301449
Bacteroidota
CGG
Pro
>WENV181184304
OEJW01142992
301449
Bacteroidota
CGG
Pro
>WENV181183249
OEJW01000042
144933
Bacteroidota
TCT
Arg
>WENV181183344
OEJW01000181
144933
Bacteroidota
TCT
Arg
>WENV181183242
OEJW01000031
141414
Bacteroidota
GGG
Pro
>WENV181183287
OEJW01000100
141414
Bacteroidota
GGG
Pro
>WENV181183571
OEJW01001025
141414
Bacteroidota
GGG
Pro
>WENV181183248
OEJW01000041
235207
Bacteroidota
CAT
Met
>WENV181183326
OEJW01000154
144659
Bacteroidota
GTG
His
>WENV181183325
OEJW01000154
144659
Bacteroidota
GTG
His
>WENV181183261
OEJW01000061
235180
Bacteroidota
CCA
Trp
>WENV181183566
OEJW01000989
235180
Bacteroidota
CCA
Trp
>WENV181183217
OEJW01000012
144596
Bacteroidota
GGC
Ala
>WENV181183295
OEJW01000107
144596
Bacteroidota
GGC
Ala
>WENV181183204
OEJW01000003
80607
Bacteroidota
GTA
Tyr
>WENV181183272
OEJW01000078
80607
Bacteroidota
GTA
Tyr
>WENV181183476
OEJW01000524
80607
Bacteroidota
GTA
Tyr
>WENV181183251
OEJW01000048
16999
Bacteroidota
GGA
Ser
>WENV181183591
OEJW01001150
16999
Bacteroidota
GGA
Ser
>WENV181183302
OEJW01000113
80614
Bacteroidota
>WENV181183417
OEJW01000310
154643
Bacteroidota
CAT
Met
>WENV181183212
OEJW01000007
338164
Bacteroidota
TTC
Glu
>WENV181183213
OEJW01000007
338164
Bacteroidota
TTC
Glu
>WENV181183252
OEJW01000049
95875
Bacteroidota
TAG
Leu
>WENV181183230
OEJW01000020
338314
Bacteroidota
CCT
Arg
>WENV181183299
OEJW01000111
139743
Bacteroidota
GGG
Pro
>WENV181183220
OEJW01000013
240012
Bacteroidota
CCC
Gly
>WENV181183219
OEJW01000013
147439
Bacteroidota
TCT
Arg
>WENV181183321
OEJW01000146
411550
Bacteroidota
CTG
Gln
>WENV181184103
OEJW01056068
338165
Bacteroidota
GGT
Thr
>WENV181183382
OEJW01000240
50727
Bacteroidota
TGA
Ser
>WENV181183232
OEJW01000021
425638
Bacteroidota
CTG
Gln
>WENV181183241
OEJW01000031
425638
Bacteroidota
CTG
Gln
>WENV181183319
OEJW01000141
185921
Bacteroidota
GTC
Asp
>WENV181183320
OEJW01000141
185921
Bacteroidota
GTC
Asp
>WENV181183193
OEJW01000001
23696
Bacteroidota
GCT
Ser
>WENV181183336
OEJW01000169
23696
Bacteroidota
GCT
Ser
>WENV181183416
OEJW01000308
23696
Bacteroidota
GCT
Ser
>WENV181183444
OEJW01000388
414426
Bacteroidota
CTG
Gln
>WENV181183191
OEJW01000001
56823
Bacteroidota
TGA
Ser
>WENV181183246
OEJW01000034
56823
Bacteroidota
TGA
Ser
>WENV181183268
OEJW01000074
56823
Bacteroidota
TGA
Ser
>WENV181183285
OEJW01000096
56823
Bacteroidota
TGA
Ser
>WENV181183681
OEJW01002630
56823
Bacteroidota
TGA
Ser
>WENV181183222
OEJW01000014
338125
Bacteroidota
CCT
Arg
>WENV181183226
OEJW01000017
338125
Bacteroidota
CCT
Arg
>WENV181183288
OEJW01000103
235129
Bacteroidota
GCC
Gly
>WENV181184360
OEJW01157491
235129
Bacteroidota
GCC
Gly
>WENV181183437
OEJW01000374
313363
Bacteroidota
GAA
Phe
>WENV181183406
OEJW01000287
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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