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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181194181
OEQQ01000001
243025
Bacteroidota
CAT
Met
>WENV181194384
OEQQ01003106
145504
Bacteroidota
TGT
Thr
>WENV181194415
OEQQ01004795
235165
Bacteroidota
CCA
Trp
>WENV181194575
OEQQ01023216
143169
Bacteroidota
GGG
Pro
>WENV181194192
OEQQ01000008
154643
Bacteroidota
CAT
Met
>WENV181194303
OEQQ01000509
150485
Bacteroidota
GTT
Asn
>WENV181194404
OEQQ01004138
150485
Bacteroidota
GTT
Asn
>WENV181194212
OEQQ01000018
353927
Bacteroidota
TTC
Glu
>WENV181194189
OEQQ01000005
414426
Bacteroidota
CTG
Gln
>WENV181194198
OEQQ01000009
151960
Bacteroidota
GGC
Ala
>WENV181194190
OEQQ01000005
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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