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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181197791
OERC01000982
24650
Bacillota
TAA
Leu
>WENV181197762
OERC01000303
155958
Bacillota
GAT
Ile
>WENV181197807
OERC01001482
144612
Bacillota
TCT
Arg
>WENV181197776
OERC01000504
235098
Bacillota
GAC
Val
>WENV181197917
OERC01007488
338152
Bacillota
TTC
Glu
>WENV181197780
OERC01000582
44854
Bacillota
TGA
Ser
>WENV181197960
OERC01012332
238489
Bacillota
GTC
Asp
>WENV181197989
OERC01016191
235154
Bacillota
GTT
Asn
>WENV181197810
OERC01001525
144577
Bacillota
GAT
Ile
>WENV181198050
OERC01032749
411591
Bacillota
GGT
Thr
>WENV181197907
OERC01006653
238910
Bacillota
CTT
Lys
>WENV181197816
OERC01001633
235150
Bacillota
TGC
Ala
>WENV181198032
OERC01025689
235137
Bacillota
TGC
Ala
>WENV181197909
OERC01006683
235294
Bacillota
TGC
Ala
>WENV181197856
OERC01003140
340802
Bacillota
TTG
Gln
>WENV181197819
OERC01001681
235091
Bacillota
CTT
Lys
>WENV181197812
OERC01001540
235079
Bacillota
GAA
Phe
>WENV181197962
OERC01012332
80836
Bacillota
GTA
Tyr
>WENV181197809
OERC01001525
235087
Bacillota
TGC
Ala
>WENV181197818
OERC01001681
338149
Bacillota
CTC
Glu
>WENV181197985
OERC01015241
413152
Bacillota
TCC
Gly
>WENV181197882
OERC01004520
411547
Bacillota
CTG
Gln
>WENV181197753
OERC01000153
235095
Bacillota
GGT
Thr
>WENV181197889
OERC01005121
411549
Bacillota
TTG
Gln
>WENV181197964
OERC01012332
240193
Bacillota
GTG
His
>WENV181197864
OERC01003586
80612
Bacillota
GTA
Tyr
>WENV181197991
OERC01016191
241432
Bacillota
TGT
Thr
>WENV181197811
OERC01001530
235124
Bacillota
TGG
Pro
>WENV181197825
OERC01001881
338129
Bacillota
TGT
Thr
>WENV181198048
OERC01030869
149274
Bacillota
>WENV181197779
OERC01000566
144583
Bacillota
ACG
Arg
>WENV181197800
OERC01001145
235171
Bacillota
CCA
Trp
>WENV181197912
OERC01006970
144621
Bacillota
GTT
Asn
>WENV181197911
OERC01006886
58712
Bacillota
CAG
Leu
>WENV181197832
OERC01002227
245296
Bacillota
CCC
Gly
>WENV181197770
OERC01000438
144594
Bacillota
CAC
Val
>WENV181197777
OERC01000543
144594
Bacillota
CAC
Val
>WENV181197797
OERC01001037
338127
Bacillota
TTG
Gln
>WENV181197963
OERC01012332
412118
Bacillota
>WENV181197967
OERC01012332
45160
Bacillota
CAA
Leu
>WENV181197831
OERC01002071
338128
Bacillota
TTC
Glu
>WENV181197910
OERC01006683
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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