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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181244677
OFFI01000567
235097
Bacteroidota
TTT
Lys
>WENV181244433
OFFI01000060
95987
Bacteroidota
CAA
Leu
>WENV181244465
OFFI01000088
95987
Bacteroidota
CAA
Leu
>WENV181244662
OFFI01000478
235102
Bacteroidota
CGT
Thr
>WENV181244727
OFFI01000761
267954
Bacteroidota
GCC
Gly
>WENV181244728
OFFI01000761
267954
Bacteroidota
GCC
Gly
>WENV181244796
OFFI01001234
267954
Bacteroidota
GCC
Gly
>WENV181245109
OFFI01014719
126965
Bacteroidota
GGG
Pro
>WENV181244801
OFFI01001277
436206
Bacteroidota
TTG
Gln
>WENV181244894
OFFI01002907
127221
Bacteroidota
TAC
Val
>WENV181244596
OFFI01000313
155123
Bacteroidota
GTT
Asn
>WENV181244762
OFFI01000951
155123
Bacteroidota
GTT
Asn
>WENV181244774
OFFI01001041
155123
Bacteroidota
GTT
Asn
>WENV181244775
OFFI01001041
155123
Bacteroidota
GTT
Asn
>WENV181244407
OFFI01000021
338124
Bacteroidota
CCG
Arg
>WENV181244630
OFFI01000364
235203
Bacteroidota
TTT
Lys
>WENV181244546
OFFI01000207
338132
Bacteroidota
GCA
Cys
>WENV181245059
OFFI01010410
104003
Bacteroidota
TAG
Leu
>WENV181244413
OFFI01000023
301449
Bacteroidota
CGG
Pro
>WENV181244456
OFFI01000081
303954
Bacteroidota
GCC
Gly
>WENV181244505
OFFI01000131
144656
Bacteroidota
GTG
His
>WENV181244539
OFFI01000196
235207
Bacteroidota
CAT
Met
>WENV181244511
OFFI01000141
80607
Bacteroidota
GTA
Tyr
>WENV181244639
OFFI01000388
113604
Bacteroidota
>WENV181244642
OFFI01000388
113604
Bacteroidota
>WENV181244658
OFFI01000470
52358
Bacteroidota
TGA
Ser
>WENV181244692
OFFI01000644
52358
Bacteroidota
TGA
Ser
>WENV181244965
OFFI01005270
144590
Bacteroidota
GTT
Asn
>WENV181244966
OFFI01005270
144590
Bacteroidota
GTT
Asn
>WENV181244650
OFFI01000434
95559
Bacteroidota
TAG
Leu
>WENV181244725
OFFI01000746
419272
Bacteroidota
CTG
Gln
>WENV181244417
OFFI01000026
144655
Bacteroidota
GGC
Ala
>WENV181244562
OFFI01000246
144639
Bacteroidota
GGC
Ala
>WENV181244781
OFFI01001096
144639
Bacteroidota
GGC
Ala
>WENV181244956
OFFI01004971
263771
Bacteroidota
CTT
Lys
>WENV181244541
OFFI01000200
151121
Bacteroidota
CAT
Met
>WENV181245024
OFFI01008246
151121
Bacteroidota
CAT
Met
>WENV181244519
OFFI01000161
139743
Bacteroidota
GGG
Pro
>WENV181245248
OFFI01045969
354570
Bacteroidota
TTC
Glu
>WENV181244701
OFFI01000660
353927
Bacteroidota
TTC
Glu
>WENV181244884
OFFI01002710
353927
Bacteroidota
TTC
Glu
>WENV181244885
OFFI01002710
353927
Bacteroidota
TTC
Glu
>WENV181245201
OFFI01032061
23696
Bacteroidota
GCT
Ser
>WENV181244500
OFFI01000121
16224
Bacteroidota
GGA
Ser
>WENV181244628
OFFI01000353
151960
Bacteroidota
GGC
Ala
>WENV181244495
OFFI01000115
16220
Bacteroidota
GGA
Ser
>WENV181244467
OFFI01000092
338125
Bacteroidota
CCT
Arg
>WENV181245057
OFFI01010261
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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