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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181247778
OFFL01000095
235097
Bacteroidota
TTT
Lys
>WENV181247785
OFFL01000099
95987
Bacteroidota
CAA
Leu
>WENV181248112
OFFL01000829
95987
Bacteroidota
CAA
Leu
>WENV181248002
OFFL01000479
267954
Bacteroidota
GCC
Gly
>WENV181248190
OFFL01001096
267954
Bacteroidota
GCC
Gly
>WENV181247891
OFFL01000263
126966
Bacteroidota
TAC
Val
>WENV181248053
OFFL01000630
126966
Bacteroidota
TAC
Val
>WENV181248603
OFFL01016899
126966
Bacteroidota
TAC
Val
>WENV181247772
OFFL01000089
436206
Bacteroidota
TTG
Gln
>WENV181247976
OFFL01000414
155123
Bacteroidota
GTT
Asn
>WENV181248056
OFFL01000650
155123
Bacteroidota
GTT
Asn
>WENV181247819
OFFL01000159
169357
Bacteroidota
CAT
Met
>WENV181248620
OFFL01020679
169357
Bacteroidota
CAT
Met
>WENV181247797
OFFL01000111
338124
Bacteroidota
CCG
Arg
>WENV181247975
OFFL01000410
338124
Bacteroidota
CCG
Arg
>WENV181247736
OFFL01000058
235203
Bacteroidota
TTT
Lys
>WENV181247824
OFFL01000170
235203
Bacteroidota
TTT
Lys
>WENV181247834
OFFL01000177
235203
Bacteroidota
TTT
Lys
>WENV181247900
OFFL01000272
235203
Bacteroidota
TTT
Lys
>WENV181248060
OFFL01000669
235203
Bacteroidota
TTT
Lys
>WENV181248484
OFFL01006044
235203
Bacteroidota
TTT
Lys
>WENV181247827
OFFL01000173
338132
Bacteroidota
GCA
Cys
>WENV181248311
OFFL01001861
301449
Bacteroidota
CGG
Pro
>WENV181248534
OFFL01008732
144933
Bacteroidota
TCT
Arg
>WENV181247897
OFFL01000272
303954
Bacteroidota
GCC
Gly
>WENV181248213
OFFL01001246
303954
Bacteroidota
GCC
Gly
>WENV181248214
OFFL01001246
303954
Bacteroidota
GCC
Gly
>WENV181248034
OFFL01000598
144656
Bacteroidota
GTG
His
>WENV181247806
OFFL01000119
235207
Bacteroidota
CAT
Met
>WENV181247926
OFFL01000328
235207
Bacteroidota
CAT
Met
>WENV181248625
OFFL01022136
144596
Bacteroidota
GGC
Ala
>WENV181247860
OFFL01000221
80607
Bacteroidota
GTA
Tyr
>WENV181247994
OFFL01000458
80607
Bacteroidota
GTA
Tyr
>WENV181248097
OFFL01000779
95559
Bacteroidota
TAG
Leu
>WENV181248299
OFFL01001685
419272
Bacteroidota
CTG
Gln
>WENV181247983
OFFL01000428
144655
Bacteroidota
GGC
Ala
>WENV181247919
OFFL01000302
144639
Bacteroidota
GGC
Ala
>WENV181248004
OFFL01000494
144639
Bacteroidota
GGC
Ala
>WENV181248294
OFFL01001645
144639
Bacteroidota
GGC
Ala
>WENV181248330
OFFL01002019
144639
Bacteroidota
GGC
Ala
>WENV181247776
OFFL01000092
263771
Bacteroidota
CTT
Lys
>WENV181248371
OFFL01002584
263771
Bacteroidota
CTT
Lys
>WENV181247796
OFFL01000109
139743
Bacteroidota
GGG
Pro
>WENV181247967
OFFL01000392
44852
Bacteroidota
TAA
Leu
>WENV181248617
OFFL01019978
425638
Bacteroidota
CTG
Gln
>WENV181247844
OFFL01000194
239647
Bacteroidota
TTT
Lys
>WENV181247774
OFFL01000089
19317
Bacteroidota
GGA
Ser
>WENV181247991
OFFL01000448
353927
Bacteroidota
TTC
Glu
>WENV181248024
OFFL01000571
353927
Bacteroidota
TTC
Glu
>WENV181248025
OFFL01000571
353927
Bacteroidota
TTC
Glu
>WENV181248452
OFFL01004608
353927
Bacteroidota
TTC
Glu
>WENV181247722
OFFL01000036
55270
Bacteroidota
TGA
Ser
>WENV181247802
OFFL01000116
55270
Bacteroidota
TGA
Ser
>WENV181248180
OFFL01001060
55270
Bacteroidota
TGA
Ser
>WENV181248324
OFFL01001976
55270
Bacteroidota
TGA
Ser
>WENV181247686
OFFL01000008
16224
Bacteroidota
GGA
Ser
>WENV181248633
OFFL01024470
151960
Bacteroidota
GGC
Ala
>WENV181248179
OFFL01001052
16220
Bacteroidota
GGA
Ser
>WENV181248171
OFFL01000997
338125
Bacteroidota
CCT
Arg
>WENV181248438
OFFL01004026
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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