This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181248692
OFFM01000001
119661
Verrucomicrobiota
CAA
Leu
>WENV181248959
OFFM01000286
155256
Verrucomicrobiota
TCT
Arg
>WENV181248804
OFFM01000042
246701
Verrucomicrobiota
TTT
Lys
>WENV181248729
OFFM01000010
345141
Verrucomicrobiota
TTG
Gln
>WENV181248731
OFFM01000010
345133
Verrucomicrobiota
GAC
Val
>WENV181248808
OFFM01000046
82054
Verrucomicrobiota
GTA
Tyr
>WENV181248788
OFFM01000039
246677
Verrucomicrobiota
CTT
Lys
>WENV181248789
OFFM01000039
246677
Verrucomicrobiota
CTT
Lys
>WENV181248949
OFFM01000259
344844
Verrucomicrobiota
GCA
Cys
>WENV181248694
OFFM01000001
155264
Verrucomicrobiota
GGG
Pro
>WENV181248730
OFFM01000010
344845
Verrucomicrobiota
CTG
Gln
>WENV181248888
OFFM01000152
128202
Verrucomicrobiota
GTC
Asp
>WENV181248732
OFFM01000010
128202
Verrucomicrobiota
GTC
Asp
>WENV181248695
OFFM01000001
414625
Verrucomicrobiota
CCC
Gly
>WENV181248931
OFFM01000230
46246
Verrucomicrobiota
TGA
Ser
>WENV181248693
OFFM01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV181248749
OFFM01000015
246700
Verrucomicrobiota
TTC
Glu
>WENV181248752
OFFM01000015
246700
Verrucomicrobiota
TTC
Glu
>WENV181249134
OFFM01000817
246700
Verrucomicrobiota
TTC
Glu
>WENV181248751
OFFM01000015
246687
Verrucomicrobiota
CGC
Ala
>WENV181248684
OFFM01000001
419909
Verrucomicrobiota
TCC
Gly
>WENV181248824
OFFM01000062
344841
Verrucomicrobiota
CAC
Val
>WENV181248688
OFFM01000001
82056
Verrucomicrobiota
TAA
Leu
>WENV181248787
OFFM01000039
344842
Verrucomicrobiota
CGT
Thr
>WENV181248926
OFFM01000227
170105
Verrucomicrobiota
CAT
Met
>WENV181248767
OFFM01000024
287733
Verrucomicrobiota
CCA
Trp
>WENV181248750
OFFM01000015
345123
Verrucomicrobiota
TGT
Thr
>WENV181248687
OFFM01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV181249135
OFFM01000817
344839
Verrucomicrobiota
GTG
His
>WENV181248852
OFFM01000100
7274
Verrucomicrobiota
CGA
Ser
>WENV181248689
OFFM01000001
246260
Verrucomicrobiota
>WENV181248790
OFFM01000039
155268
Verrucomicrobiota
CGG
Pro
>WENV181248948
OFFM01000259
82181
Verrucomicrobiota
AAG
Leu
>WENV181248685
OFFM01000001
246728
Verrucomicrobiota
GAA
Phe
>WENV181248690
OFFM01000001
7256
Verrucomicrobiota
GCT
Ser
>WENV181248748
OFFM01000015
345115
Verrucomicrobiota
CAT
Met
>WENV181248960
OFFM01000287
345119
Verrucomicrobiota
TAC
Val
>WENV181248807
OFFM01000046
345124
Verrucomicrobiota
GTT
Asn
>WENV181248887
OFFM01000152
17023
Verrucomicrobiota
GGA
Ser
>WENV181248753
OFFM01000015
368497
Verrucomicrobiota
GCC
Gly
>WENV181248952
OFFM01000263
368497
Verrucomicrobiota
GCC
Gly
>WENV181248696
OFFM01000001
345142
Verrucomicrobiota
CCG
Arg
>WENV181249136
OFFM01000817
246709
Verrucomicrobiota
CAT
Met
>WENV181248686
OFFM01000001
154693
Verrucomicrobiota
TGG
Pro
>WENV181248766
OFFM01000024
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK