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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181259564
OFFW01000488
235097
Bacteroidota
TTT
Lys
>WENV181259322
OFFW01000001
267954
Bacteroidota
GCC
Gly
>WENV181259775
OFFW01002519
267954
Bacteroidota
GCC
Gly
>WENV181259807
OFFW01003200
126965
Bacteroidota
GGG
Pro
>WENV181259479
OFFW01000192
48053
Bacteroidota
TGA
Ser
>WENV181259737
OFFW01001875
48053
Bacteroidota
TGA
Ser
>WENV181259437
OFFW01000113
415410
Bacteroidota
TTG
Gln
>WENV181259604
OFFW01000723
80835
Bacteroidota
GTA
Tyr
>WENV181259582
OFFW01000655
127221
Bacteroidota
TAC
Val
>WENV181260131
OFFW01017791
155123
Bacteroidota
GTT
Asn
>WENV181259808
OFFW01003200
341950
Bacteroidota
>WENV181259528
OFFW01000309
338124
Bacteroidota
CCG
Arg
>WENV181259394
OFFW01000051
338132
Bacteroidota
GCA
Cys
>WENV181259414
OFFW01000078
280660
Bacteroidota
CCA
Trp
>WENV181259415
OFFW01000078
280660
Bacteroidota
CCA
Trp
>WENV181259534
OFFW01000342
235207
Bacteroidota
CAT
Met
>WENV181260278
OFFW01047132
144596
Bacteroidota
GGC
Ala
>WENV181259488
OFFW01000206
80607
Bacteroidota
GTA
Tyr
>WENV181259324
OFFW01000001
151121
Bacteroidota
CAT
Met
>WENV181259678
OFFW01001469
44852
Bacteroidota
TAA
Leu
>WENV181259425
OFFW01000085
19317
Bacteroidota
GGA
Ser
>WENV181260324
OFFW01063850
353927
Bacteroidota
TTC
Glu
>WENV181260200
OFFW01026337
16224
Bacteroidota
GGA
Ser
>WENV181259969
OFFW01008225
151960
Bacteroidota
GGC
Ala
>WENV181260352
OFFW01075574
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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