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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181277205
OFGL01000732
235097
Bacteroidota
TTT
Lys
>WENV181277255
OFGL01000923
95987
Bacteroidota
CAA
Leu
>WENV181277518
OFGL01004520
235102
Bacteroidota
CGT
Thr
>WENV181277034
OFGL01000195
126966
Bacteroidota
TAC
Val
>WENV181277846
OFGL01041292
126966
Bacteroidota
TAC
Val
>WENV181276872
OFGL01000012
415410
Bacteroidota
TTG
Gln
>WENV181277648
OFGL01010983
127221
Bacteroidota
TAC
Val
>WENV181277341
OFGL01001375
155123
Bacteroidota
GTT
Asn
>WENV181277371
OFGL01001713
155123
Bacteroidota
GTT
Asn
>WENV181277630
OFGL01009968
341950
Bacteroidota
>WENV181277631
OFGL01009968
341950
Bacteroidota
>WENV181276861
OFGL01000006
338124
Bacteroidota
CCG
Arg
>WENV181276874
OFGL01000017
338124
Bacteroidota
CCG
Arg
>WENV181276906
OFGL01000050
235203
Bacteroidota
TTT
Lys
>WENV181277014
OFGL01000156
235203
Bacteroidota
TTT
Lys
>WENV181277423
OFGL01002433
235203
Bacteroidota
TTT
Lys
>WENV181277695
OFGL01015843
235203
Bacteroidota
TTT
Lys
>WENV181276910
OFGL01000055
338132
Bacteroidota
GCA
Cys
>WENV181277484
OFGL01003622
193809
Bacteroidota
CAT
Met
>WENV181277000
OFGL01000140
144656
Bacteroidota
GTG
His
>WENV181277040
OFGL01000212
235207
Bacteroidota
CAT
Met
>WENV181277022
OFGL01000173
80607
Bacteroidota
GTA
Tyr
>WENV181277036
OFGL01000198
80607
Bacteroidota
GTA
Tyr
>WENV181277163
OFGL01000551
113604
Bacteroidota
>WENV181277166
OFGL01000551
113604
Bacteroidota
>WENV181277002
OFGL01000141
52358
Bacteroidota
TGA
Ser
>WENV181277023
OFGL01000179
52358
Bacteroidota
TGA
Ser
>WENV181277168
OFGL01000557
52358
Bacteroidota
TGA
Ser
>WENV181277298
OFGL01001073
52358
Bacteroidota
TGA
Ser
>WENV181277172
OFGL01000568
95559
Bacteroidota
TAG
Leu
>WENV181276991
OFGL01000130
419272
Bacteroidota
CTG
Gln
>WENV181276894
OFGL01000039
144655
Bacteroidota
GGC
Ala
>WENV181276997
OFGL01000138
144639
Bacteroidota
GGC
Ala
>WENV181277103
OFGL01000340
263771
Bacteroidota
CTT
Lys
>WENV181277392
OFGL01002005
151121
Bacteroidota
CAT
Met
>WENV181277075
OFGL01000297
44852
Bacteroidota
TAA
Leu
>WENV181276990
OFGL01000130
132360
Bacteroidota
GGG
Pro
>WENV181276905
OFGL01000047
425638
Bacteroidota
CTG
Gln
>WENV181276871
OFGL01000012
19317
Bacteroidota
GGA
Ser
>WENV181277131
OFGL01000455
353927
Bacteroidota
TTC
Glu
>WENV181277132
OFGL01000455
353927
Bacteroidota
TTC
Glu
>WENV181277523
OFGL01004603
353927
Bacteroidota
TTC
Glu
>WENV181276863
OFGL01000007
16224
Bacteroidota
GGA
Ser
>WENV181277376
OFGL01001763
151960
Bacteroidota
GGC
Ala
>WENV181277217
OFGL01000782
16220
Bacteroidota
GGA
Ser
>WENV181277003
OFGL01000148
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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