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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181279184
OFGN01000161
235097
Bacteroidota
TTT
Lys
>WENV181279164
OFGN01000123
95987
Bacteroidota
CAA
Leu
>WENV181279131
OFGN01000103
267954
Bacteroidota
GCC
Gly
>WENV181279496
OFGN01000858
267954
Bacteroidota
GCC
Gly
>WENV181279582
OFGN01001261
267954
Bacteroidota
GCC
Gly
>WENV181279238
OFGN01000243
126966
Bacteroidota
TAC
Val
>WENV181279695
OFGN01002310
126966
Bacteroidota
TAC
Val
>WENV181279955
OFGN01011119
153993
Bacteroidota
GAT
Ile
>WENV181279459
OFGN01000711
436206
Bacteroidota
TTG
Gln
>WENV181280057
OFGN01025586
127221
Bacteroidota
TAC
Val
>WENV181279035
OFGN01000021
155123
Bacteroidota
GTT
Asn
>WENV181279257
OFGN01000273
155123
Bacteroidota
GTT
Asn
>WENV181279720
OFGN01002616
155123
Bacteroidota
GTT
Asn
>WENV181279019
OFGN01000011
338124
Bacteroidota
CCG
Arg
>WENV181279090
OFGN01000066
338124
Bacteroidota
CCG
Arg
>WENV181279241
OFGN01000247
235203
Bacteroidota
TTT
Lys
>WENV181279252
OFGN01000263
235203
Bacteroidota
TTT
Lys
>WENV181279414
OFGN01000575
235203
Bacteroidota
TTT
Lys
>WENV181279057
OFGN01000030
338132
Bacteroidota
GCA
Cys
>WENV181279663
OFGN01001926
301449
Bacteroidota
CGG
Pro
>WENV181279574
OFGN01001227
303954
Bacteroidota
GCC
Gly
>WENV181279575
OFGN01001227
303954
Bacteroidota
GCC
Gly
>WENV181279426
OFGN01000589
144656
Bacteroidota
GTG
His
>WENV181279101
OFGN01000073
235207
Bacteroidota
CAT
Met
>WENV181279298
OFGN01000346
235207
Bacteroidota
CAT
Met
>WENV181279444
OFGN01000647
143169
Bacteroidota
GGG
Pro
>WENV181279220
OFGN01000217
80607
Bacteroidota
GTA
Tyr
>WENV181279355
OFGN01000440
80607
Bacteroidota
GTA
Tyr
>WENV181279309
OFGN01000371
95559
Bacteroidota
TAG
Leu
>WENV181279471
OFGN01000767
95559
Bacteroidota
TAG
Leu
>WENV181279333
OFGN01000404
144655
Bacteroidota
GGC
Ala
>WENV181279032
OFGN01000021
144639
Bacteroidota
GGC
Ala
>WENV181279317
OFGN01000380
144639
Bacteroidota
GGC
Ala
>WENV181279402
OFGN01000566
144639
Bacteroidota
GGC
Ala
>WENV181279258
OFGN01000274
263771
Bacteroidota
CTT
Lys
>WENV181279331
OFGN01000398
44852
Bacteroidota
TAA
Leu
>WENV181280023
OFGN01019458
425638
Bacteroidota
CTG
Gln
>WENV181279401
OFGN01000562
19317
Bacteroidota
GGA
Ser
>WENV181279357
OFGN01000447
353927
Bacteroidota
TTC
Glu
>WENV181279410
OFGN01000571
353927
Bacteroidota
TTC
Glu
>WENV181279437
OFGN01000625
353927
Bacteroidota
TTC
Glu
>WENV181279438
OFGN01000625
353927
Bacteroidota
TTC
Glu
>WENV181279060
OFGN01000035
56823
Bacteroidota
TGA
Ser
>WENV181279213
OFGN01000209
56823
Bacteroidota
TGA
Ser
>WENV181279537
OFGN01001042
56823
Bacteroidota
TGA
Ser
>WENV181279671
OFGN01002009
56823
Bacteroidota
TGA
Ser
>WENV181279092
OFGN01000070
16224
Bacteroidota
GGA
Ser
>WENV181279378
OFGN01000525
151960
Bacteroidota
GGC
Ala
>WENV181279535
OFGN01001038
16220
Bacteroidota
GGA
Ser
>WENV181279661
OFGN01001913
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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