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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181280301
OFGO01000066
95987
Bacteroidota
CAA
Leu
>WENV181280567
OFGO01000622
235102
Bacteroidota
CGT
Thr
>WENV181280234
OFGO01000015
267954
Bacteroidota
GCC
Gly
>WENV181280882
OFGO01002711
267954
Bacteroidota
GCC
Gly
>WENV181281291
OFGO01027568
144657
Bacteroidota
CGG
Pro
>WENV181280492
OFGO01000405
126966
Bacteroidota
TAC
Val
>WENV181281016
OFGO01005329
126965
Bacteroidota
GGG
Pro
>WENV181281153
OFGO01013236
153993
Bacteroidota
GAT
Ile
>WENV181281114
OFGO01009754
338486
Bacteroidota
CAT
Met
>WENV181280779
OFGO01001838
436206
Bacteroidota
TTG
Gln
>WENV181280901
OFGO01003096
127221
Bacteroidota
TAC
Val
>WENV181280310
OFGO01000076
155123
Bacteroidota
GTT
Asn
>WENV181280752
OFGO01001567
155123
Bacteroidota
GTT
Asn
>WENV181280233
OFGO01000013
338124
Bacteroidota
CCG
Arg
>WENV181280529
OFGO01000508
235203
Bacteroidota
TTT
Lys
>WENV181280435
OFGO01000298
338132
Bacteroidota
GCA
Cys
>WENV181281148
OFGO01012885
104003
Bacteroidota
TAG
Leu
>WENV181281338
OFGO01038202
58714
Bacteroidota
CAA
Leu
>WENV181280343
OFGO01000113
141414
Bacteroidota
GGG
Pro
>WENV181280385
OFGO01000165
144656
Bacteroidota
GTG
His
>WENV181280423
OFGO01000271
235207
Bacteroidota
CAT
Met
>WENV181280402
OFGO01000201
80607
Bacteroidota
GTA
Tyr
>WENV181281314
OFGO01032604
16999
Bacteroidota
GGA
Ser
>WENV181281057
OFGO01007024
144590
Bacteroidota
GTT
Asn
>WENV181281058
OFGO01007024
144590
Bacteroidota
GTT
Asn
>WENV181280571
OFGO01000640
95559
Bacteroidota
TAG
Leu
>WENV181280257
OFGO01000026
144655
Bacteroidota
GGC
Ala
>WENV181280308
OFGO01000076
144639
Bacteroidota
GGC
Ala
>WENV181280391
OFGO01000174
144639
Bacteroidota
GGC
Ala
>WENV181280361
OFGO01000136
263771
Bacteroidota
CTT
Lys
>WENV181280392
OFGO01000178
151121
Bacteroidota
CAT
Met
>WENV181281270
OFGO01023111
354570
Bacteroidota
TTC
Glu
>WENV181280520
OFGO01000491
353927
Bacteroidota
TTC
Glu
>WENV181280867
OFGO01002565
353927
Bacteroidota
TTC
Glu
>WENV181281377
OFGO01051740
185921
Bacteroidota
GTC
Asp
>WENV181281186
OFGO01013880
23696
Bacteroidota
GCT
Ser
>WENV181280585
OFGO01000711
55270
Bacteroidota
TGA
Ser
>WENV181280649
OFGO01001005
55270
Bacteroidota
TGA
Ser
>WENV181280331
OFGO01000100
16224
Bacteroidota
GGA
Ser
>WENV181280874
OFGO01002664
151960
Bacteroidota
GGC
Ala
>WENV181280384
OFGO01000164
16220
Bacteroidota
GGA
Ser
>WENV181280358
OFGO01000131
338125
Bacteroidota
CCT
Arg
>WENV181281271
OFGO01023158
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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