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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181288479
OFGZ01000126
119661
Verrucomicrobiota
CAA
Leu
>WENV181288338
OFGZ01000002
155256
Verrucomicrobiota
TCT
Arg
>WENV181288381
OFGZ01000024
246701
Verrucomicrobiota
TTT
Lys
>WENV181288334
OFGZ01000001
345141
Verrucomicrobiota
TTG
Gln
>WENV181288692
OFGZ01000614
345133
Verrucomicrobiota
GAC
Val
>WENV181288380
OFGZ01000023
82054
Verrucomicrobiota
GTA
Tyr
>WENV181288369
OFGZ01000018
246677
Verrucomicrobiota
CTT
Lys
>WENV181288375
OFGZ01000022
344844
Verrucomicrobiota
GCA
Cys
>WENV181288342
OFGZ01000003
155264
Verrucomicrobiota
GGG
Pro
>WENV181288335
OFGZ01000001
344845
Verrucomicrobiota
CTG
Gln
>WENV181288639
OFGZ01000484
128202
Verrucomicrobiota
GTC
Asp
>WENV181288649
OFGZ01000514
128202
Verrucomicrobiota
GTC
Asp
>WENV181288343
OFGZ01000003
414625
Verrucomicrobiota
CCC
Gly
>WENV181288539
OFGZ01000216
46246
Verrucomicrobiota
TGA
Ser
>WENV181288423
OFGZ01000075
97755
Verrucomicrobiota
TAG
Leu
>WENV181288376
OFGZ01000022
246700
Verrucomicrobiota
TTC
Glu
>WENV181288378
OFGZ01000022
246700
Verrucomicrobiota
TTC
Glu
>WENV181288427
OFGZ01000076
246700
Verrucomicrobiota
TTC
Glu
>WENV181288554
OFGZ01000251
246687
Verrucomicrobiota
CGC
Ala
>WENV181288339
OFGZ01000003
419909
Verrucomicrobiota
TCC
Gly
>WENV181288337
OFGZ01000001
344841
Verrucomicrobiota
CAC
Val
>WENV181288480
OFGZ01000126
82056
Verrucomicrobiota
TAA
Leu
>WENV181288368
OFGZ01000018
344842
Verrucomicrobiota
CGT
Thr
>WENV181288623
OFGZ01000427
170105
Verrucomicrobiota
CAT
Met
>WENV181288354
OFGZ01000011
287733
Verrucomicrobiota
CCA
Trp
>WENV181288377
OFGZ01000022
345123
Verrucomicrobiota
TGT
Thr
>WENV181288424
OFGZ01000075
345110
Verrucomicrobiota
CCT
Arg
>WENV181288428
OFGZ01000076
344839
Verrucomicrobiota
GTG
His
>WENV181288488
OFGZ01000132
7274
Verrucomicrobiota
CGA
Ser
>WENV181288481
OFGZ01000126
246260
Verrucomicrobiota
>WENV181288370
OFGZ01000018
155268
Verrucomicrobiota
CGG
Pro
>WENV181288374
OFGZ01000022
82181
Verrucomicrobiota
AAG
Leu
>WENV181288340
OFGZ01000003
246728
Verrucomicrobiota
GAA
Phe
>WENV181288482
OFGZ01000126
7256
Verrucomicrobiota
GCT
Ser
>WENV181288425
OFGZ01000076
345115
Verrucomicrobiota
CAT
Met
>WENV181288400
OFGZ01000051
345119
Verrucomicrobiota
TAC
Val
>WENV181288379
OFGZ01000023
345124
Verrucomicrobiota
GTT
Asn
>WENV181288541
OFGZ01000222
17023
Verrucomicrobiota
GGA
Ser
>WENV181288426
OFGZ01000076
368497
Verrucomicrobiota
GCC
Gly
>WENV181288555
OFGZ01000256
368497
Verrucomicrobiota
GCC
Gly
>WENV181288344
OFGZ01000003
345142
Verrucomicrobiota
CCG
Arg
>WENV181288429
OFGZ01000076
246709
Verrucomicrobiota
CAT
Met
>WENV181288341
OFGZ01000003
154693
Verrucomicrobiota
TGG
Pro
>WENV181288353
OFGZ01000011
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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