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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181300290
OFHN01000657
235097
Bacteroidota
TTT
Lys
>WENV181300053
OFHN01000068
95987
Bacteroidota
CAA
Leu
>WENV181300590
OFHN01002612
235102
Bacteroidota
CGT
Thr
>WENV181299926
OFHN01000003
267954
Bacteroidota
GCC
Gly
>WENV181300311
OFHN01000780
126966
Bacteroidota
TAC
Val
>WENV181301045
OFHN01024506
338155
Bacteroidota
CTC
Glu
>WENV181300762
OFHN01005757
126965
Bacteroidota
GGG
Pro
>WENV181300514
OFHN01002089
339341
Bacteroidota
GGT
Thr
>WENV181300480
OFHN01001799
415410
Bacteroidota
TTG
Gln
>WENV181299967
OFHN01000010
127221
Bacteroidota
TAC
Val
>WENV181300408
OFHN01001235
127221
Bacteroidota
TAC
Val
>WENV181299985
OFHN01000021
338124
Bacteroidota
CCG
Arg
>WENV181300321
OFHN01000884
235203
Bacteroidota
TTT
Lys
>WENV181300041
OFHN01000062
338132
Bacteroidota
GCA
Cys
>WENV181301076
OFHN01030070
104003
Bacteroidota
TAG
Leu
>WENV181299996
OFHN01000026
280660
Bacteroidota
CCA
Trp
>WENV181299997
OFHN01000026
280660
Bacteroidota
CCA
Trp
>WENV181300226
OFHN01000447
144656
Bacteroidota
GTG
His
>WENV181300147
OFHN01000231
235207
Bacteroidota
CAT
Met
>WENV181301280
OFHN01081016
144596
Bacteroidota
GGC
Ala
>WENV181300142
OFHN01000222
80607
Bacteroidota
GTA
Tyr
>WENV181301068
OFHN01029257
16999
Bacteroidota
GGA
Ser
>WENV181300513
OFHN01002089
80614
Bacteroidota
>WENV181300629
OFHN01003106
144590
Bacteroidota
GTT
Asn
>WENV181300630
OFHN01003106
144590
Bacteroidota
GTT
Asn
>WENV181300278
OFHN01000638
95559
Bacteroidota
TAG
Leu
>WENV181300129
OFHN01000198
419272
Bacteroidota
CTG
Gln
>WENV181300167
OFHN01000291
144655
Bacteroidota
GGC
Ala
>WENV181300173
OFHN01000312
144639
Bacteroidota
GGC
Ala
>WENV181300032
OFHN01000049
263771
Bacteroidota
CTT
Lys
>WENV181299928
OFHN01000003
151121
Bacteroidota
CAT
Met
>WENV181300874
OFHN01011787
151121
Bacteroidota
CAT
Met
>WENV181300934
OFHN01014709
354570
Bacteroidota
TTC
Glu
>WENV181300299
OFHN01000690
50727
Bacteroidota
TGA
Ser
>WENV181300335
OFHN01000939
50727
Bacteroidota
TGA
Ser
>WENV181300130
OFHN01000198
132360
Bacteroidota
GGG
Pro
>WENV181300790
OFHN01006720
19317
Bacteroidota
GGA
Ser
>WENV181300472
OFHN01001727
353927
Bacteroidota
TTC
Glu
>WENV181300574
OFHN01002521
353927
Bacteroidota
TTC
Glu
>WENV181300890
OFHN01012419
23696
Bacteroidota
GCT
Ser
>WENV181299968
OFHN01000011
16224
Bacteroidota
GGA
Ser
>WENV181300761
OFHN01005714
151960
Bacteroidota
GGC
Ala
>WENV181300192
OFHN01000338
16220
Bacteroidota
GGA
Ser
>WENV181300069
OFHN01000082
338125
Bacteroidota
CCT
Arg
>WENV181300834
OFHN01009723
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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