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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181329088
OFLW01000002
235507
Bacillota
GAA
Phe
>WENV181329104
OFLW01000008
235507
Bacillota
GAA
Phe
>WENV181329224
OFLW01000072
235507
Bacillota
GAA
Phe
>WENV181329130
OFLW01000015
37110
Bacillota
TAA
Leu
>WENV181329327
OFLW01000660
146699
Bacillota
TCG
Arg
>WENV181329240
OFLW01000090
18465
Bacillota
GCT
Ser
>WENV181329242
OFLW01000090
18465
Bacillota
GCT
Ser
>WENV181329227
OFLW01000077
80838
Bacillota
GTA
Tyr
>WENV181329230
OFLW01000077
80838
Bacillota
GTA
Tyr
>WENV181329127
OFLW01000015
37089
Bacillota
TAA
Leu
>WENV181329243
OFLW01000090
146697
Bacillota
ACG
Arg
>WENV181329123
OFLW01000015
237285
Bacillota
TGT
Thr
>WENV181329226
OFLW01000077
237285
Bacillota
TGT
Thr
>WENV181329229
OFLW01000077
237285
Bacillota
TGT
Thr
>WENV181329109
OFLW01000008
237286
Bacillota
CTT
Lys
>WENV181329113
OFLW01000008
237286
Bacillota
CTT
Lys
>WENV181329324
OFLW01000660
113680
Bacillota
TAG
Leu
>WENV181329090
OFLW01000002
412107
Bacillota
TCC
Gly
>WENV181329108
OFLW01000008
412107
Bacillota
TCC
Gly
>WENV181329112
OFLW01000008
412107
Bacillota
TCC
Gly
>WENV181329326
OFLW01000660
412107
Bacillota
TCC
Gly
>WENV181329363
OFLW01005376
353391
Bacillota
GCC
Gly
>WENV181329087
OFLW01000002
80839
Bacillota
GAG
Leu
>WENV181329103
OFLW01000008
338550
Bacillota
>WENV181329126
OFLW01000015
146698
Bacillota
CAT
Met
>WENV181329129
OFLW01000015
146698
Bacillota
CAT
Met
>WENV181329084
OFLW01000001
39475
Bacillota
TAA
Leu
>WENV181329124
OFLW01000015
39475
Bacillota
TAA
Leu
>WENV181329106
OFLW01000008
258936
Bacillota
GGT
Thr
>WENV181329111
OFLW01000008
339364
Bacillota
TTG
Gln
>WENV181329131
OFLW01000015
339362
Bacillota
GTT
Asn
>WENV181329220
OFLW01000067
37307
Bacillota
TGA
Ser
>WENV181329089
OFLW01000002
339363
Bacillota
GCC
Gly
>WENV181329325
OFLW01000660
339363
Bacillota
GCC
Gly
>WENV181329356
OFLW01004691
286963
Bacillota
CTT
Lys
>WENV181329083
OFLW01000001
59079
Bacillota
CAA
Leu
>WENV181329228
OFLW01000077
237284
Bacillota
TAC
Val
>WENV181329200
OFLW01000044
292519
Bacillota
CAT
Met
>WENV181329223
OFLW01000072
292519
Bacillota
CAT
Met
>WENV181329245
OFLW01000090
23575
Bacillota
GGA
Ser
>WENV181329110
OFLW01000008
145469
Bacillota
TCT
Arg
>WENV181329204
OFLW01000046
353527
Bacillota
TTC
Glu
>WENV181329247
OFLW01000094
353527
Bacillota
TTC
Glu
>WENV181329086
OFLW01000002
261708
Bacillota
CCA
Trp
>WENV181329239
OFLW01000090
16361
Bacillota
TGA
Ser
>WENV181329241
OFLW01000090
16361
Bacillota
TGA
Ser
>WENV181329085
OFLW01000002
237288
Bacillota
CCA
Trp
>WENV181329244
OFLW01000090
339361
Bacillota
CCT
Arg
>WENV181329225
OFLW01000074
292012
Bacillota
TGC
Ala
>WENV181329238
OFLW01000090
292012
Bacillota
TGC
Ala
>WENV181329283
OFLW01000167
292012
Bacillota
TGC
Ala
>WENV181329338
OFLW01002136
292012
Bacillota
TGC
Ala
>WENV181329091
OFLW01000002
376360
Bacillota
GCA
Cys
>WENV181329105
OFLW01000008
376360
Bacillota
GCA
Cys
>WENV181329318
OFLW01000546
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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